mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTTGGCACTAGCACATTTTTGC AATCATGTGCAGTGCCAATAT TGGCCGATTTTGGCACTAGCACATTTTTGCTTGTGTCTCTCCGCTCTGAGCAATCATGTGCAGTGCCAATATGGGAAA 3 1 5' arm Macaca_nemestrina mirbase mir-96 1e-37 cfa-mir-96 5e-39 -34.4 ...((.((.((((((((.((((((..(((((((((......)))...))))))..)))))))))))))).)).))... (-34.40)