mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCATCGTCATCATCGTCGTCG AATGGTGAGGGCGATGAAG GCGGGGGAATGGTGAGGGCGATGAAGGTGGTGGGTTGCGGTCTCTCCATCCTCAACCCCATTTCTTCTTACAACATTCCTTCATCACCATCATCGTCATCATCGTCGTCGTCTGATAAT GCGGGGGAATGGTGAGGGCGATGAAGGTGGTGGGTTGCGGTCTCTCCATCCTCAACCCCATTTCTTCTTACAACATTCCTTCATCACCATCATCGTCATCATCGTCGTCGTCTGATAATGCTTTGCCCTCTCTCCCATTTACAAAACGTAGGTCAATAATCTTCACTGCCTCAGTAGTAGCAGCTTCCTATCTTCAACTGTACCCAAAATCTCCATTTCAATCTGCAATCGCCCAACAACTGGATGAAATTCAGCTGGAAGAAGATCGTGTAGTTCGTCTGTTTGAGTTCTCGAGCAACATGCCGACGTACGATGCATCTTTCCGTGATTTGGATTTCTGAAATTTAGATCCAATTTGTTTCAATTGAAACATCACCATCTGTGGTTTTCATTAAAGACCTTGAAATCATCAATAACCCAAAAAACTCTGATGAGTTAGTAATGGTGGATGATGAGAAAGCAAAAGTTGAAGGGACAGGTTCAGGCTTCATTTGGGATACATTTGGTCATATCGTGACAAATTATCATGTTGTTGAAAAGTTGGCTACAGATCAAAACGGGAGACAACGTTGTAAGATATTCTTAGTTGACAAAAATGGCAACGGTTTTTCTAGAGATGGAAAGATTATTGGTGTTGACCCATCTTGTGATCTGGCTGTTTTAAAGGTTGATGTTGAAGGGATTGAAATAAAGCCGGTAGATATTGGAAATGCTGGTAAACTAAACGTGGGACAAAGTTGTTATGCTATTGGGAATCCTTATGGATATGAGAATACATTAACCACTGGGGTAGTGAGTGGGTTGGGAAGGGAGATACCATCACCAAATGGAGGTGCCATTAG 2 2 3' arm Cichorium_intybus mirnest mir-598 0.000007 100 -35 .((((.(((((((((.((((((((.((((((((((((.((.........)).))))))........................)))))).)))))))).)))))))..)).))))..... (-35)