mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAAGCGTATAGCTTTTCCCCTT GAGGAAAAGTTATAACGGTTATG GAGGAAAAGTTATAACGGTTATGTTCATAATAACAGTCGTAAGCGTATAGCTTTTCCCCTT 5 1 3' arm Acyrthosiphon_pisum mirbase 100 bmo-mir-965 0.00001 -19.74 ..((((((((((((.((.(((((..............))))).)))))))))))))).... (-19.74)