mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAAGCGTATAGCTTTTCCCATT AGGGGAATGCTGTACACTCTATG CGAAGTAAATCGACGAATTCTGAAAGGGGAATGCTGTACACTCTATGTGCTAAAAATATCCATAAGCGTATAGCTTTTCCCATTTAGCGTTCGTTGCGAGCAAA 3 1 3' arm Anopheles_gambiae mirbase 100 aga-mir-965-2 2e-54 -35.2 ....((....((((((((.(((((.((((((.(((((((.((.((((.(.((....)).))))))).))))))).)))))).))))).))))))))...))... (-35.20)