mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTGAGCAAAGTTTCAGGTGT GCCTGACTCTTTGCTCTGCCC TATAAAGCATCCGAACGTTACGGGCGGGCCTGACTCTTTGCTCTGCCCGTATCTTTTTTTCCACTCTGGGTGAGCAAAGTTTCAGGTGTGTCCGTGACAG 3 1 3' arm Apis_mellifera mirbase mir-87 5e-31 tca-mir-87a 0.0000003 -47.03 ................((((((((((.((((((..((((((((.(((((.................)))))))))))))..)))))).)))))))))).. (-47.03)