mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACGTCATCATCATCATCTTCG AGGATCATGATATGATTCAT AAATGGGATCGGAGGATCATGATATGATTCATAATAAAAATAAAGATAGGTTTTCGTCTTCAACGTCATCATCATCATCTTCGCACTGTAAC GGGGTCTCACTCTTTTCATTCCCAACAAAACACAAACATAAATCCTTCATATTTATATAGAATCAGAGCTTCAATTCAGGATCATAAAGCAAGAATCTTTTTTTTTTCAAAAATTAGATCAAGAAATGGGGAGGCCTCCATGTTGTGATAAACTTGGTGTCAAGAAAGGTCCATGGACTCCTGAAGAAGATATTATGCTTGTTTCATACGTTCAGCAACATGGCCCTGGGAATTGGCGTCAAGTCCCAACCAACACCGGGCTGAGAAGATGCAGTAAGAGTTGTAGGCTGCGATGGACGAATTATCTGAGGCCTGGAATCAGAAGGGGAGATTTCACAGATGATGAGGAGAAAATGATCATTCAGCTTCAAGCTCTTCTGGGCAACAAATGGGCGGCTATAGCTTCTTATCTTCCTGAAAGAACTGATAACGATATCAAGAATTACTGGAATACCCATTTGAAAAAGAAGCTCAGGAAACTAGAAATGGGATCGGAGGATCATGATATGATTCATAATAAAAATAAAGATAGGTTTTCGTCTTCAACGTCATCATCATCATCTTCGCACTGTAACTCTAGAGGCCAATGGGAGAAGAGGCTTCAAACCGATATTCAGATGGCAAAACAAGCCTTAACCGATGCTTTGTCAATAGATCACAAACCGGCTTTTCTACCTCAAACAACTAAATCATCCTCTCAAACGCCTGCATACCCTTCTAGCACTGATACCATAGCCAAATTACTCAAAGGCTTCATGAAAAACTCCCCCAATAACGCCAAAACATGT 4 1 3' arm Cichorium_intybus mirnest mir-598 0.0003 100 -13.7 ...........((((((.((((((((((.....((.(((((........))))).)).......))))).))))).)))))).......... (-13.7)