mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAAGCGTATAGCTTTTCCCATT GGGGGAAATCCTGTGCGCTCTATG CTGGCAGATTCTGAAGGGGGAAATCCTGTGCGCTCTATGTTGCATTTTATCGACCCATAAGCGTATAGCTTTTCCCATTCAGCGTGTGCCCA 3 2 3' arm Culex_quinquefasciatus mirbase 100 aae-mir-965 5e-18 -39.1 ..((((.((.(((((..((((((..(((((((((.((((...(........)...)))))))))))))..)))))).))))).)).)))).. (-39.10)