mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAGTGGAGTAGTGGTCTCATCG AGATTCTACTTCTCCGACTTAA AAAAATTATCACGATATGAAATAAGTGGAGTAGTGGTCTCATCGCTTAGTATTAGAAAAGTGAGATTCTACTTCTCCGACTTAATTCATATTTAGCTCGAAAC 3 2 5' arm Culex_quinquefasciatus mirbase 100 aae-mir-1175 1e-40 -30.5 ............((((((((.(((((((((.(((((..((.((((((..........))))))))..))))).)))).))))).))))))))........... (-30.50)