mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CCTCTTCCTCTTCCTCTTCCC GAAGCGGTGGAGAAGTGGAT ACTTGCTTCCTCCTCTTCCTCTTCCTCTTCCCTCGTCTCCCCGGCGCCACCTGACTGATTGGATTGGTATCGATCCAAGCCTATCAGCCTAGCTAGTGACCTGAGTACTCTGCTGTCTGCTGCCTGAATCTGAATCGATCGATCACTCGCTCGCTGCCTGAAGAGAGCAAGAATCGATGGTTGCACGGCGAAGATTGCTACACCTTCGCTGATAAATAGCAGAGGACAATCTCATCGGCATCCATGGAGGGCAGCAGCAGCTCGAAGGAGATAGTCGAAGCGGTGGAGAAGTGGATGGCGTTCC GATTCTTTCTGTCGCCTACTTGCTTCCTCCTCTTCCTCTTCCTCTTCCCTCGTCTCCCCGGCGCCACCTGACTGATTGGATTGGTATCGATCCAAGCCTATCAGCCTAGCTAGTGACCTGAGTACTCTGCTGTCTGCTGCCTGAATCTGAATCGATCGATCACTCGCTCGCTGCCTGAAGAGAGCAAGAATCGATGGTTGCACGGCGAAGATTGCTACACCTTCGCTGATAAATAGCAGAGGACAATCTCATCGGCATCCATGGAGGGCAGCAGCAGCTCGAAGGAGATAGTCGAAGCGGTGGAGAAGTGGATGGCGTTCCCCACCTCCGGCGGAGGCGGCGCCACCGCCGGCTTGGAGATAGTCGCCGAGGATGCGCCTATCGGAAGCCGCGGGGCCCACAGTACTAGGCGTG 5 1 5' arm Oryza_sativa mirnest 100 mtr-MIR2673b 0.0002 -90.8 ...((((...(((.((((.(((.((.((((....((((((..(((.....((((....((((((((....)))))))).....))))....))).(((.......)))((.((((.(((((((((...((((.....((((((..((.((((.((......)).)))).)).))))))((.(((.(((.((.(((((.....((((.((((.....)))).)))).))))))).)))))).)).)))))))))))))))))..)).))))))....)))).)).))))))).))).)))).... (-90.8)