mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CAACGAGGAGGCCGGGACCGT TGACCCGGCCTCCTCGTCGGC GATGCATCCGCCAACGAGGAGGCCGGGACCGTCGGATCCGGCTGACCCGGCCTCCTCGTCGGCGGAGGGGA TTCCCTCGCTCTGCTCTCTCCATGCCCAGGCGAGGGAGTCCGCCGCCTCGCCTCCTCACGCGAGCCACTGCTGTCGCCGCACCATCGTACTGTCGTCGCCATCCTCCTCTCGCTCCGGTCGATGCATCCGCCAACGAGGAGGCCGGGACCGTCGGATCCGGCTGACCCGGCCTCCTCGTCGGCGGAGGGGAGACCGACTGTCACCCTCTCTACTCTTCTCCTTCTACGTCCGGCCCCGCTACCACGACGGCCGCGCGGATCGCGTGAGGCAACGGGTGGCTGCTCCCTANTCTTCTCCCTCTCCCTCTCCATTCTCTTCCTTTGCAGATCGGNGGAGGCTTGCAACAACAACAACGGCTGCGTGG 4 0 5' arm Oryza_sativa mirnest MIR1846 1e-24 osa-MIR1846e 0.000000000003 -45.2 ......((((((.((((((((((((((...((((....))))...)))))))))))))).))))))..... (-45.2)