mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTGAGCAAAGTTTCAGGTGTAT GTGCCTGAAATTTTAGCTCAAACCT TTAATAACTTGAGGTTTGTCTGAGGTGCCTGAAATTTTAGCTCAAACCTAATAATAGAAGGTGAGCAAAGTTTCAGGTGTATCAGCTGAACTTATATATCT 3 3 3' arm Lottia_gigantea mirbase mir-87 0.00009 cte-mir-87b 0.0000003 -34.8 ...........(((((((.((((.(..(((((((((((.((((..((((.........)))))))))))))))))))..).)))).)))))))........ (-34.80)