mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CAACGAGGAGGCCGGGANCGT GACCCCGGCCTCCTCGTCGGC GATGCATCCGCCAACGAGGAGGCCGGGANCGTCGGATCCGGTGACCCCGGCCTCCTCGTCGGCGGAGGGGA TTCCCTCGCTCTGCTCTCTCCATGCCCAGGCGAGGGAGTCCGCCGCCTCGCCTCCTCACGCGAGCCACTGCTGTCGCCGCACCATCGTACTGTCGTCGCCATCCTCCTCTCGCTCCGGTCGATGCATCCGCCAACGAGGAGGCCGGGANCGTCGGATCCGGTGACCCCGGCCTCCTCGTCGGCGGAGGGGAGACCGACTGTCACCCTCTCTACTCTTCTCCTTCTACGTCCGGCCACCGCTACAACGACGGCCGCGCGGATCGCGTGAGGCAACGGGTGGCTGCTCCCTACTCTCCTCCCTCTCCCTCTCCATTCTCCTTCTTTGCAGATCGGCGGAGGCTTGCAACAACAAC 3 0 5' arm Oryza_sativa mirnest MIR1846 8e-32 osa-MIR1846e 6e-17 -45.5 ......((((((.((((((((((((((..(((((....)))))..)))))))))))))).))))))..... (-45.5)