mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ATGAAGTGTTTGGGGGAACTT CTTTCTCTGAACACTTCATAC GACTTTCTCTGAACACTTCATACAAGAGGTTATCCATCTAATCTAAAAGTCATTAGATATTTACGATGGGTCGTTCTTCAATGAAGTGTTTGGGGGAACTT 5 0 3' arm Medicago_truncatula mirbase mir-395 0.000001 mtr-MIR395g 0.0000003 -35.7 ...((((((..((((((((((..(((((...(((((((((((((((......))))))...)).)))))))..)))))..))))))))))..))))))... (-35.70)