mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTGGCATTCTGTCCACCTCCAT GGAGGCGGCCAGGATGCCAAAT CAGAGCCATTTTGGCATTCTGTCCACCTCCATATATACCAATTCTTCTGAATTGGCGCCCACAAGCGTTTGGAGGCGGCCAGGATGCCAAATTGGCTCTGTA 3 0 5' arm Vitis_vinifera mirbase MIR394 1e-50 vvi-MIR394a 0.00000000002 -59.5 ((((((((.((((((((((((.((.((((((......(((((((....)))))))(((......)))..)))))).)).)))))))))))).)))))))).. (-59.50)