mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTGAAGTGTTTGGGGGAACTC GTTCCCCTGACCACTTCATTG GCCCCCTAGAGTTCCCCTGACCACTTCATTGGGGATCTTCTCTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCAT 4 0 3' arm Vitis_vinifera mirbase mir-395 1e-37 vvi-MIR395j 6e-39 -40.8 ....((..(((((((((..(.(((((((.((((((((.........)).)))))).))))))).)..)))))))))..))...... (-40.80)