mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTGAAGTGTTTGGGGGAACTC GTTCCCCTGACCACTTCACTG GTACCCTAGAGTTCCCCTGACCACTTCACTGGGGATCTTCTCTAATGACTTCCCACTGAAGTGTTTGGGGGAACTCCTGGTGTCAT 4 0 3' arm Vitis_vinifera mirbase mir-395 7e-36 vvi-MIR395j 4e-37 -44.2 (.((((..(((((((((..(.(((((((.((((((((.........)).)))))).))))))).)..)))))))))..)).))).. (-44.20)