mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGCCAAAGGAGATTTGCCCGG GGGCAAATTATCTTTTGGCAGG GCATATTACAGGGCAAATTATCTTTTGGCAGGCAGCCACTTAGAGACACAGCCAAGCCATGCATTCTTGTAGTGTGCCCTCTGCCAAAGGAGATTTGCCCGGCAATTCTTCT 2 1 3' arm Vitis_vinifera mirbase mir-399 7e-58 tcc-MIR399b 1e-16 -42.1 ..........(((((((((.((((((((((((..((((((..((((....((........))..))))..)))).))..)))))))))))))))))))))............ (-42.10)