mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GGCTGCTGAGAAAATGTAGGA CGGTTTCTCAGCAACCAA TTTGTTTTCGTCCGGTTTCTCAGCAACCAAACAGGGTTCATTCGATTTTGAAATTCCTACATCGGATGCTGGGTGTTGGCTGCTGAGAAAATGTAGGAAGAGGGA 3 3 3' arm Vitis_vinifera mirbase 100 vvi-MIR3629c 0.000001 -35.3 ....(((((.(((..((((((((((.((((.(((....((((((((...(......)...)))))))))))....)))).)))))))))).....))).))))). (-35.30)