mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGCAGTTGCTGCCTCAAGCTT GCATGAGGCAACAACTGCAGT ACCAAGCATGAGGCAACAACTGCAGTACTTGTGGGGAAGGCACAAGTAGGACACCAACATTACCTGCAAGCAAGACGCAAAATTAATAGAACATCACCATACTTGTGGCTTTCTTGCAAGTCGTGCAGTTGCTGCCTCAAGCTT 2 0 3' arm Hordeum_vulgare micropc MIR444 8e-77 hvu-MIR444a 5e-56 -63.7 ...((((.(((((((.((((((((..(((((..((((((.((((((((((...................((.....))..........(.....).)).)))))))).))))))..)))))..)))))))).))))))).)))) (-63.70)