mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTTAGACACTTCAGCGCCATG GGGCGCTGAGGTGTCTTAGGTT ACCAAATCCCCGGGCGCTGAACTTAGACACTTCAGCGCCATGTCCACTGGCGCTGGAAGGCGTGCCACCGCGGATGGGAGACTAAGTCACCTTGCCAATGCATATTTAGCGTCCCCCTATTTGGGCGCTGAGGTGTCTTAGGTTCAGCGCCCAGGGGTTTTT ATAGCCACCGTGATCGATCGATCCAACGACGGAAAACCGCCGCCGCGGCCGAATCCGAGCCCCGCCGGCGAGATCCTCGCGGCGGCCCGGCGGCCGGCGAGGCCCCACGCGCGCTCGCGCGCTCGTGCCTTCCTCGTCACGACACCCCTAGGTTCATCCTAGGAGGAGGGGAATTCGGATTTTGGATTTTGGGGCATCGTGTTAATGGCGGTGCGGCCGGGGTGGGCGGTGGCGGTGGCGCGGGCGTCGGCGGCGGCGTGGCAGCGCGTGGCGTGCAACCCGGAGACGCTCCCCGCCGACCAGGTCCTCGGGCTGCTCTGCTGCGCGCCGCTCCACCTCCTCGCCCGCCTCGCCGCGTTCCTCTGCATCCCCTTCGTCCCCGTCCAAGCCATGCCCCGCCTCCTCTCCCCTCGCCTGCAAGGCCACCCGCGCCGCCTCCTCCTCCTCCCGCCTCAGGAGTTCGTCGAAGTCGAACCTATGTACTCCCCTTTCCCTTCCTCCTCCTCGTCCTCGTCGGATGACGATGACGACAGCGACATCGAGGACGGGGAGATTGTTCATCTTCACTTCGATTGAGGTTCGCGGCTGGTCACTTACCGCCTTTGATTTCGTATCCATTTGTTCATAGTCTAGCAATCCTAGCGTGTGGAAAGGAATTGTGAATTGTGGAACTCTGGATAATATGTAGCTCTAGTGACAAATGACACAAATTCAGCTGAAATTTTCACAATTTGTCCCTTTGCAAAAACTTTTTTTACAAATGAACCGCTGCCCAAACTTATTTCAAAAATGACTCTTTTGGTCAGCACCAAATCCCCGGGCGCTGAACTTAGACACTTCAGCGCCATGTCCACTGGCGCTGGAAGGCGTGCCACCGCGGATGGGAGACTAAGTCACCTTGCCAATGCATATTTAGCGTCCCCCTATTTGGGCGCTGAGGTGTCTTAGGTTCAGCGCCCAGGGGTTTTTAAAAAAGGATTAAAGAAAAAATTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAAGCGCCCCCTTGGGCCCCCCGGGGGGGGGGCCCCGCGGCCCCAATTTTCCCCCAATAAAGGGAGTCCTAATAAACCCGGCCCCCCTCCTCGGGCGCGCCGCTTTTTTTCACCCACCCCGCCGGGCCGGGGGGAGAAAAACCCGTGGGGGTTTTTCCTCCCATCATTATTATCCCCTTCCCGTGTTGTGGCACACAACCCCCCCCCCCCTCCTCTCTCCCCCAGGCGGCCGGGGGCGGGGGGAAAGGATATAGAAAAGAAG 3 1 5' arm Oryza_sativa mirnest 100 osa-MIR2122 0.00000000000004 -79.1 ...(((((((.((((((((((((((((((((((((((((.........(((((((((..((((((....))((..(((.(((...))).)))..)).))))...)))))))))..........)))))))))))))).)))))))))))))).))))))).. (-79.1)