mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTCGGTGGAAGATCTTCCTTT GGGACCGTCGGTCTACCGAGCA TATACAAGTTCCGAAAAACACTGGGACCGTCGGTCTACCGAGCAATATTTAACCAGCTCGGTGGAAGATCTTCCTTTCGTCTTTTAAGCCTTCCAC CCCGGGCTGCAGGAATCGAATTCAACTATTTTAGTATGGGTTGATTGGTTTCATAACACACCTCCCCGAAGGTCATGGGTTCAAGATCAGAGTACGAATATTAATTTTTTTTTTTCTTCATTTCTCTTCAACTATTGAGGTACGCCATGCGTTACGGCTTATTATTCAAATTAACCCACTCCAATACCCGAGAGATTTACGCCTTTAAATATTTTCCCGTTGTAAGGTAAAGGTTCTCAGAGCGGTCGACGAGGGTAGTTGCTTACTGACGCAAAACAAAAGACTGCCGATAGAAAATACATACTCTTCCTGATAATGTACACAGCAGGCAATGTAATACAAAATGAGATCTGTCATGTGCGTCTGTCGGTTACTCACCGTCAGAAGAGTGGCGCTTGTAGGAGTTCACTTCGCTTTAGCTTGCGGGTTCAGTTTCAAAAACAGCATATATACAAGTTCCGAAAAACACTGGGACCGTCGGTCTACCGAGCAATATTTAACCAGCTCGGTGGAAGATCTTCCTTTCGTCTTTTAAGCCTTCCACCGGTTCATCAATAAACCTTTTGGAAATGATAGATTGAATGTGTCATATGTTTGGACTTCACGACCTTTCCTTGTACATGGCGCCGTATGTACCGCCCCTGAAGGGTAGTATATTGTACGAAATG 5 1 3' arm Bombyx_mori mirnest mir-2774 0.00000000000002 bmo-mir-2774a-4 0.00000000002 -25.7 ............((((.((...((((..(((..((((((((((............)))))))))).)))..))))...)).))))........... (-25.7)