mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTGGGCTGGGGGCGGGGGAGT TTAAAAGCCCCAAGGTCCACAG GGAAAGAGGGAGTGGGCTGGGGGCGGGGGAGTTATTCTGCAGGACTTGCCAAGGAAAATAACCAGTAATTTAAAAGCCCCAAGGTCCACAGGGGCAAAG TTTTTTTTTTTTTTTTTTGTGAGATGTTTCTTTATTGGAAGGGATGTGTGTTTGTTTTGATGAGAGTTCACCAGCAAACATCAGATTAGAACCAAACAAAGAGAGTCTGGGACTGCCCGCACAGGAAGCAAGCTGGGCACAGGCTCTTTTCTTCCGTGTGTCTTGCTCCACCTGGGAAAAGTCTTGGGCTGAGAGAAATCTGGCTCAAAACAAACGGCCAGCAGAAGACAGCACTTCAGGTCAACAGGTTCAACGTTTTCCATCACTGTTGAACAAAATGAAGCCCTTCTCCTTTACAAAGAAACAGCAGTGAGGCTGAAGACAGCCTCCCCGATCCCTGCTGCAATATGAAGGGCCAGGCAGTTTCGCAGTCCTGAGCATGATCTGGGCAGGTAGTGTCCTAAAGCAAGGAAGGGGAAAGAGGGAGTGGGCTGGGGGCGGGGGAGTTATTCTGCAGGACTTGCCAAGGAAAATAACCAGTAATTTAAAAGCCCCAAGGTCCACAGGGGCAAAGCAGCACTAACAGTGGGAAAGGGATGCCAGGATCCACATGGAAAGGCCATGAGGATGGGTTCTGGGACAGAAGAGGCGGTGAGTTCTGCCATCGGTCTTGGATTCTGCGCCTGGCCCCACTGGCAATGGCTTCTGCACATCTGCTCTCAGAGTTCATCATGATTGAGGTCTTTGGGCTCATGGCAGGCTGCTGGGGTGACAAACTCCATCAAGTACTCACAGCGGCTGGGCTCTGTCGTGATGTGACCACTGTCTCCTTACCACATGGAAGTTCACAGTGTGATCGGTTGGGGCCCTGCCAGCATCCGGTCATGTCATATTTCATGACA 5 1 5' arm Anolis_carolinensis mirnest 100 100 -27.6 ...........(((((((.(((((....((((((((((...((.....))..))).........)))))))....)))))..))))))).......... (-27.6)