mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGTGTGACAATGGTGTTTGTA AAACGCCATTATCACACTAA TCTTCTTTCCTGCTGGAGCTGTGGAGTGTGACAATGGTGTTTGTATCCAATCCGTCAAACGCCATTATCACACTAAATAGCTACTGCTAGAGAAGCC CGGTACCGGACATATGCCCGGGAATTCGGCATTACGGCCGGGAAGCAGTGGTATCAACGCAGAGTGTCCATTACGGCCAGGGGAACAGACTCATGAAAGCCCGTCAAAGTACTGTAGCTAAGAGCATCAGGGACAGAAACCTCATGTTTTGTACTTGAGAGAAAAGCCAAAGGCAACATAAGTATAAAGAGCAAATAACAGCAATACAACAAAACAGGAGCATCCTCCATTTATGTGGGATGCGTGCCTCAAGAACCAGTGATTGGCTCTTCTAAGAGATCCATTCAGACCAATGCAAAATGCCAAGGTGAATCAGTCAATATGCCTGAAATGTTTGCAGATTGGACACACGTTGGCACTGAGGCCCAATATTCAATAAGCGGCACTATCTTCACTTATTCTTCTTCAGCACCCATTGAAGGAATCCACAGTTGTACTTCTATAAATCTAGAGCTGCCAGTGTTGCATCTCCCTTAAGGATCTTCTTTCCTGCTGGAGCTGTGGAGTGTGACAATGGTGTTTGTATCCAATCCGTCAAACGCCATTATCACACTAAATAGCTACTGCTAGAGAAGCCATCGGTTCAGGTTTGGGGCAGGAGGAAGAAGAAGAGAATACAACCGTTTTCAAGACAACTCTTTACTTTTATGGAGTCAAAAGACTATACATTAAATAAAAATATGCTCTGCTTTCCTAAAACTACGAAAAAAAAAAAAAAAGGCCGCCTCGGCCCTCGAGAAGCTTCTAGACCATTCGTTGCGCGCGGGCCCAGTAGGTAAGTGAA 2 0 5' arm Anolis_carolinensis mirnest mir-122 3e-35 gga-mir-122-1 2e-27 -39 .(((((((...((...((((((..(((((((.(((((((((((.((.......))))))))))))).)))))))..))))))...)).))))))).. (-39)