mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TATTTGTTTGGGTTTGTTTCT AAAGAGAAAGAAAGAGAAAG TTGTAGTTTCTTATTTGTTTGGGTTTGTTTCTGTTTCGGATGTAGTCAAGAGATTTGAATTTATGATTGCTACCATTGCATTTGAATGTTTGCCTGCCGCACATTATATGGCAGCTGCTTCTGGGGGATAAATTGACTGTGGGAAAGAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAGAA GAAAGAGAAACTGTATGGCTGTTGTGTACCGCGCCATCCTGCGAACGACAGAGGCACAATCGGTCAATGTTCACTATTATTACTACTACACTATCATCGATAGTTCCTATTTGAATTCGCCATGTTGATTTTTAAAAGGTGATAAACATCAATCTGGCAAATATGAGTAGCAAAGCAGATGAAGAAATGGACGTAAGCAGCAAGGAGGAAGAGAAGGGAGAAGAAGAAGAGAAGGAAGAAAAGCAGAAAGATGAGAGTGAAGTTGATATAATCGTCTGCATCTACATTGTAATATCTTGTTTGTAGAGATGGAATTGAGAATGATGTATATTAGAACATTTGTGATTTTATTATAAGTCAAGCAGAAGGAGACTATGTTTAATTTGCATGTTAGAAGAAGAACTCTTTCTGATCGTAGATGAAGTCATTTTTTTAATAGTAGTCAACTTTTGTGTGATCTTTGTAGAAACCCAACATTTTTTTCTCTTTCTTTCTTTTTGTCATCCTTTCCATTAGATGGACATGTCTTGATTTTGGTTAATTTTGCAACTAGAATGAGCTCGAGGCAGTTATTTGCTTTGTAGTTTCTTATTTGTTTGGGTTTGTTTCTGTTTCGGATGTAGTCAAGAGATTTGAATTTATGATTGCTACCATTGCATTTGAATGTTTGCCTGCCGCACATTATATGGCAGCTGCTTCTGGGGGATAAATTGACTGTGGGAAAGAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAGAAAAAGA 5 1 5' arm Paracentrotus_lividus mirnest 100 bta-mir-2310 0.0006 -33.2 ......((((((.(((.(((...(((.(((((.((((...(((((((((...((((...((...((..(((.((((........(((((..((.....)))))))..)))).)))....)).)).))))...))))))))).....)))).))))).)))..))).))).))))))..... (-33.2)