mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCGGACCAGGCTTCATTCC AATGTTGTCTGGCTCGAGG TGAGGTTGAGAGGAATGTTGTCTGGCTCGAGGTCATGGAGGAGGAGAGTTCTCAGATAAACTCTTTCACCCAAAGTTTCCAATGGAAATTTACCCTCTAACACCAAAATGATTCTCGGACCAGGCTTCATTCCCCCCACCCAA ATCAGTTTCTACTTTCTAATCATCAACTTCTTCAAACACATCATATGAATATAGCTACCTAGGTGCTGTTTTCTTTTCCAACTTCCTCATATCTTGTTCATTCCTTGCAAAGGTGAGGTTGAGAGGAATGTTGTCTGGCTCGAGGTCATGGAGGAGGAGAGTTCTCAGATAAACTCTTTCACCCAAAGTTTCCAATGGAAATTTACCCTCTAACACCAAAATGATTCTCGGACCAGGCTTCATTCCCCCCACCCAACTTTTGCTATTTTCTTTCTCGTAATCTTCATATTTTGCATGCCCCCATGCTTGTTTTTGCAGGATCAGAATTTTCAACTCACTACCCATCTTCTTTTGTTTTACCTGTAAATATCTTTATAAAGGCCGGTGAAAATTATAGGGAAGGCAACTTCATAATTTACTTGGGAAAAAGGCTTGCCATCATTTTCATCAACATCTGAATGAATGTACTTCAGTGAAATGACAGTGACGAGTGTTGAAGGCATGCACTCACTAGCCGCTGAAAGTTGCTGAGAAGCATATGCTAAATGTGAAAGAGTAATGAATGAAAGAAGAGAAGAGAAGAGAAGTGCTGGAACAGTTAACGAGAAGAAGTGAGAATCAGGAGAAGCTAGCAAGCTAGGGATTCTATGTGTCTGAGTCTGTGACTCTT 3 0 3' arm Phaseolus_vulgaris mirnest mir-166 0.00000000000004 pvu-MIR166a 2e-77 -40.9 ...((.((...((((((..((((((.(((((((((((((((.((((((((........))))))))......((((((((...))))))))..))))).........)))).)))))).))))))..))))))...)).)).. (-40.9)