mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GCGGCCAGGCGGCGGGCGGCG CCCCTGCACCACTGGCTGCAC GGGCGCGGACGGCGGCCAGGCGGCGGGCGGCGAGCGGCGCGTGGAGGCGGCGGCCGTGCTGGCGGCGTCGCTGCAGCCCACGGGCACGACGCTGTCGGAGACGGCCGTGGCCCCGCGCGTGCCGGCGCCCCTGCACCACTGGCTGCACGAGTACCA GGGCATTAGGTGACNTATANNGACAGTTTGTACAAAAAGCAGGCTGGTACCGGTCCGGAATTCCCGGGATCCGCGACGAGCTCGAAGCGCTCCGCCGCGACTCGCGCCAGCCCCTGGGCGACCTGTTACCTCCCGGCTACATGCCTGCCAATTCGCCGCCGCCCTCGGACTACGGACCCGACGCCGACGATTCGGCCGACGACGAGCGCACAATCGCGGAGCAAGAGCGCCTCGAACCGGCCGAGGACGCCGCCGACGAGTTGGCGGCCCTGCATCGAGACGCCGATCTGGCCATCGACGAATTACGACGCCGATACGCCCCGCGCGACGACCGCCCCGACGGCGACGGTTCGGAGACCGACCGAGACGACGGCGTCGAAGACGACGACGACGCTGAGAACGAAGACGACGAAGAACAGGAGGACGACGACGCTAGCGAAGACGACTCCGAAGCCAGCGAGTCCACCGCGGCGTCGGAAGGCATGGAAGCCCTCATAGACGAGCCGGGCGCGGACGGCGGCCAGGCGGCGGGCGGCGAGCGGCGCGTGGAGGCGGCGGCCGTGCTGGCGGCGTCGCTGCAGCCCACGGGCACGACGCTGTCGGAGACGGCCGTGGCCCCGCGCGTGCCGGCGCCCCTGCACCACTGGCTGCACGAGTACCAGCAGGTGGGGCAGCACTGGCTGGGCAGCATGAACGCCCGCGGCCACTAGGGGAGCCAGGGCGACAAGATGGGGCTGGCCATGAATGTGCAAACGTGCGGCGAGGGGGCGGGCCTAGCGCATGGAACTACTGGAACGTAGGGTCTAAGCATGTAATGAGGCAAACGGAGTCGGCGTGGCCGGACGGGAAATAGGAGTGCCCGCGTAAGCCGGCACCCGGATGGGAGGGAGGCTGAGGTATAGATGGGATAGCAGTAGGGGAAGGTGGTGTTATATGAGAGAGTGGTGTAGTGAGCTAGGTGGGGCTTGAGTGTGGTGCCCGGGGGCAAGCCTTACGCCGACAGGTGGCCGTTAGTCGCTGCGGTATGCGGAGTGAGTGCGGGTCTCGAGATACGTAACATGCGACTGTAGGGTATTGTAATAAGCTAGGTACGTTGGAGGAGAAGACGTGTATAGGGGTTAGGACTTGACACAGCATAAGCTTCGTGAACGAGCAATGAACGGGCGAGCGCGCAGCTGTACGACCACGTGCTCCGCTGTGGTAGATTGTGCTCATATCGATGTCGCGCGGGCTCCGCCTAGAACTTGGCGCCATGCACGGCCACCCGCGGAAAAACACGGTGAAGTGACATTACTGGTGGAGCCGTCGAACGTATATGTGCGTCACCTAAGAACATTCGCGTGGCTCAGCATGATTGAGTGCCACGTCGACATATCACTCGGTAGTGACTGGCCGCTTGCTTCTGGATGTGGCCCGTG 3 2 5' arm Spodoptera_littoralis mirnest 100 100 -95.4 .((.((...((((((((((...(((((.((((..((((((((((.(((.((((((((.((((((((((((.(((.........)))))))))))))))..)))))))).)))))))))..)))).)))))))))....)))))))).)).)).)). (-95.4)