mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAGAAAGCTGTGGGAGAATAT GCTTTTCCACAGCTTTCTTGA GGTCATGCTTTTCCACAGCTTTCTTGAACTTCTTGTATGTGCATCCATCCATCTCAACTTCTTCTAAGTAAGTATGTAATTACAGTCTTATCCCTACAACTAATCAAGAAGCTCAAGAAAGCTGTGGGAGAATATGGC TCTTCTCCTTTCTATACCAATGCTTCACCATTTCTTCATCCTTCCTTCCTTCCTTCATTCATTCATTCAACAGATCTGAGTCCTGGTCATGCTTTTCCACAGCTTTCTTGAACTTCTTGTATGTGCATCCATCCATCTCAACTTCTTCTAAGTAAGTATGTAATTACAGTCTTATCCCTACAACTAATCAAGAAGCTCAAGAAAGCTGTGGGAGAATATGGCAATTTCAGGCCTTTCTTGTATTTCTCTACTCTGATTCTCTCAACATCGGGAAATAGTGGAAAAATAAAGAATCAACACTTTGAGCAACGGGCACACGAAACCCATGAAGCAGCTTTGTGAATTGTGACACGACATCGTATGAGTTACCAGAGATTCAGCTGTAAGTAACTGATCATGGATGCTTGGTGATTGGTGACCTGAACCCTTCAATGACACTCATGAAAAGATGAAACTGAATCATCAGATAATTTTCCTAGTACGGAATTATTCTTGCTTTCAAACTATAACACCACTGTTCAACTTTTTTAC 1 0 3' arm Arachis_duranensis mirnest MIR396 0.00000000003 ptc-MIR396e 0.000000000002 -42.5 .((((((.(((((((((((((((((((.(((((((..((((..........................(((((..(((....)))..)))))...))))......))))))).))))))))))))))))))).)))))) (-42.5)