mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GGGCGTCATGCAGGAGATGAT CGTCTTCGACACGGCGCCCAC CGCGTGAGCAAGGGCGTCATGCAGGAGATGATTAACGCTCTACCCGGCATCGACGAGGCGATGAGCTATGCGGAGGTGATGAAGCTGGTCAACGGCATGAACTTCTCGGTAGTCGTCTTCGACACGGCGCCCACAGGACATA CGCGAATCTGTTCTGATCATATCCACAGATCCGGCCCACAACATATCGGATGCAGGCGATCAAAAGTTCACCAAGGTGCCCACAAAGGTTAATGGCTTCGACAACCTGTTCGCCATGGAAATCGACCCCAATGCCGGTCTTAACGAGCTGCCCGAGGAGTACTTCGAGGGCGAAAACGAGGCGCTGCGCGTGAGCAAGGGCGTCATGCAGGAGATGATTAACGCTCTACCCGGCATCGACGAGGCGATGAGCTATGCGGAGGTGATGAAGCTGGTCAACGGCATGAACTTCTCGGTAGTCGTCTTCGACACGGCGCCCACAGGACATACACTGCGTCTGATTGCGTATCCCCAAGTGGTGGAGAACGGGCTGGGCAAGCTGCTGCGTCTTAAGATGAACGTGGCGCCGCTGCTGTCACAGTTCGTCTCCATGCTGGGCATGGCTGACTTAAACGCCGACACACCTCTCCCACAAGCTACACCACATCGCTGCGCGTCCATCACCCAGCTCCACCGACCCAAACCAAAAACCCAGATCAAGAGCACATACGCATGAGATCCGCATCACCCCAGCCACACACCACGACTGAAAGACAGAACGGAACGGCGAGAGACCAAGAACCACGCCCGCAAGCGCCCCATCGACGCGCCCAAACCAAAACCCGAGCAAAAGCCACAGACGCAGACCCACGCACACAACACAAACAACCAGCCGCCACACACAGACACGCGCAACAACCGCACTCAACACCCACACACGAAGTAACACAAAACACCACGCCAACCCGAACGAGAACTAACCAGGGCACGACCGCGAAGAAAGCAAGAGAAACACGGAGAGGCGCACCCCACACCGAAAAGCAACGGCAAGGAAAAACACACAAAGCCCGACCACAGCGGGAGAAAACAACGGAAAGAACGAACAACAGAGGAACACACCCAAAAGACAGCATAGAAGCAAGCAGAACACGAAGACGGACAGAGCAGGCAAACGACAGGCACACGAGGGAAGACAAGAAGAACAAGGAGAAAGCCACGAACCCCGGAGCACGGAAGAAGACGGAGACCACAGACGGAGACACAAAGGGGAAAGAGGCAGGGCAAAGGAACGAGGAAAGAGGGAGACAGAGAAGGAGACG 3 0 5' arm Drosophila_yakuba mirnest 100 100 -46.5 .((....))..(((((((.((..(((((((((((..((((..((((.......)).))....))))....(((((((......((((.....))))....))))).)).)))))))))))..)).))))))).......... (-46.5)