| mature miRNA: AAACAGGTTAATCCGTCAACT species: Helianthus tuberosus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|125449858|gb|EL461554.1|EL461554 CHTS16133.b1_I01.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS16133, AAACAGGTTAATCCGTCAACT EST sequence (targeted fragment marked with yellow): CGAGTGAGACTCAAAGAAAACAATCCGTGAGTCATACATTCAACCAATAGGAGAACCAATTTCACTCACAGAAAGGGGATGATAGTGCAACTCTGATCGACTGATCGTTCTCACCAAACCCTCCTTTTACGGCAAAACAAAACAATCTCCTTCATTTTCATCCCCTCCTTCCTCATTCATCTCCGTTTTTAAAGAAAAAAAAATGGAAAAGGAATCAGCTTCGATGGCGGAACTGTCCAACACTACCCATTTGACTGCTTCGGTTGTGGACACACGGGATAAAGTTGCTACTGATGTGGAGAAGGCTGAAGAAAATGCTCCAGTTATACACCTGGGTTTAGACTATCGACTTAAATATGGGATTATCTGGCTCTTCGTCACAATGCAACTTGTGGCATCTGCAGTTACAAATGGTGTCGAGTATCTGCTGACCGATTATGATGTTCCTGCCCAAGCTGTTGGATTAACCAGTTTACTTGTACTTTTTAATCTCTTGTTGTTGCCCTCGTTTTTTGATGCAATGGAAGATCTTCTCCACTTTTGGTACAGGTGGAGATACCCTATCTTCATATTCTCAGCTTTCTTTTGTTGGTTTTTCTGGTGGCTACACATTTCTTGCAATTGGCTCAACCTGTCTTACTCAAATGCTATGATGTGTGCGCTTTCGCGATCATTTTAGTTTAGTTTCCTCATGAGTGGGAGTAGTAGTTGTGTTGGTTATGTTTCTTTTATTTTTCGGTCGTCTTACTATTAGATCGAGTTCCATCAGTGT | |||||||||