| mature miRNA: AAGAAAGCTGTGGGAGAATAT species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|298187585|gb|HO034734.1|HO034734 ocpsga0_0340_F03.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN AAGAAAGCTGTGGGAGAATAT EST sequence (targeted fragment marked with yellow): GGGGGGGTGAAATTGCAGGACCCTGTGTAGTGTGTAGTCTCCAGACAAACATGGCGAAGAAGGCAAAAGGGTCTCACTCTGCTTCTTCTGCCTCTGCATCTTCCCGCAAACTAGTGCTGAGGATTAAATCAAACGAGGGAATCAAGAGATCAGTGCGGCAGACTAATTCAAGAAAGAAACCCAAAGCAAAGCAAAAGAAGAACAAACAAATGTTTTATGCTATGAAACCCAAGAAATCTCCGACAGCTTTCTTCTACTTCTTGGAGGATTTTCGTAAAGAATTTCAAGAGCAGAATCCAGATGTAAAGTCAATGCGTGATATTGGCAAGGCATGTGGAGAGAAGTGGAAAACAATGACTTATGAGGAGAAGGTTCAATACTATGATATAGCAACAAAAAAACGTGAAGAATTTGATAACGCAATGGCTGAATTTAATAAGAAAATGGAAAATGGCGAGTTTGACGAAACTGATGATGAATCAG | |||||||||
gi|197666169|gb|FD480435.1|FD480435 RL11-14 Glycine max cv. BX10 root long-term (RL) SSH library Glycine max cDNA, mRNA sequence AAGAAAGCTGTGGGAGAATAT EST sequence (targeted fragment marked with yellow): TCGAGCGGCCGCCCGGGCAGGTTTCATATTCAGAGGGAGGACTAGGATACTCCCCAGGACAATATGTTCCCCAACTGCTTTCTTCTGCATTTGAAGCTGTTGTTGCATAGATATTCAGACCTTCAGGAAGAAGACCTTCAAAGACCTCGGCCGCGACCACGCTA | |||||||||
gi|298183333|gb|HO028546.1|HO028546 ocpsga0_0257_F09.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN AAGAAAGCTGTGGGAGAATAT EST sequence (targeted fragment marked with yellow): GGGGGAAACAGTAGGGCTGTTGGAATGACCAAGCAAGAAGTAATTGAGGAATGCAAGCTATTTTACCTGGCAGGGCAAGAGACCACTTCATCTCTGCTGGTTTGGACAATGGTCTTATTGGCTAGGTATCCAGAATGGGCAAGCACGAGCAAGGGACGAAGTTTTTCAAGTTTTTGGAAACCAAAATCCAAACATTGATGGGTTAAGTAAGCTTAAAATTGTGACCATGATTTTATACGAGGTTCTCAGGCTATATCCTCCAACAACTTTCTTTAGTCGCGCACCTCAAAAGGATGTGAAACTTGGAAATCTATCACTACCTGCAGGAATACGCATTACCATGCCAATATTATTTATTCATCATGATGGTGATATCTGGGGTGATGATGCAAAGGAGTTCAAACCTGAAAGGTTTTCTGAAGGAATTGCTAAGGCAACAAAAGGCCAAGTTTCGTTTTATCCATTTGGATGGGGTCCTAGAATATGCATTGGCCAAAACTTTGCCTTAATGGAAGCAAAGATAGTGTTATCATTGCTTC | |||||||||
gi|192324021|gb|FK019312.1|FK019312 GLND919TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence AAGAAAGCTGTGGGAGAATAT EST sequence (targeted fragment marked with yellow): GGACACCTTTTCTCTCTCTTAGCTTAGCCTTCTCCTATTCTGGACCTCTGTCCCTTCCTCTTGATTAGGGTTCTAATTATGTTATGAACCTTCCATGCTTTTATTTTTCTTTTAAAAAAAGAATAAAGAAAACCCTACATATGGGTTTGTGGGGTATATTCAGTCTTCAATATCATGGCTCTCTTTGTATTCTTCCACAGCTTTCTTGAACTGCATCCAAAGAGTTCCTTTGCATGCATGCCATGGCACTCTTACTCCCAAATCTTGTTTTGCGGTTCAATAAAGCTGTGGGAAGATACAGATAGGGTCAACAACGGACTAGTTTATCTCAAACTCCAGATTCTTCTCTAAATCTTCCTATCCAATTATATATAGGGATAAAATTATTGCAAAGTATTTTTTTTCCTTTTTCTTTTGTGATTTGACTTAATTTAAATCATTTTCAGATTTAAACCATCGACTTTTCAGGTATATCTCTATATGTGATCAGAATTCTCAGATGCAGTATTATGAGAGAATAAACTTGTACCAATTGGGTAGATTTGTGACGATGATGAGGAAGAGGATATGATGATTCCCCAACAATTTGGCTTCTTTCTGGAATTAAACCGATCAGGTATTGATTTGATCTATGCAAAATCAAGGGAATTTGGGCTCACGATTTTGGTAGATGCGGAATTACTATGCAAACTTTATTTTCAGATCTTATAATTATAATAATTAATTTGTTCGAAAACCGTTATATGTGTTTGCCTTAAATTTTATACCCCTATTTAATTTTCTCTTAATTAATTTTGTCCAGCAATT | |||||||||
gi|193681360|gb|FK623250.1|FK623250 454GmaGlobSeed357882 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA AAGAAAGCTGTGGGAGAATAT EST sequence (targeted fragment marked with yellow): CGGCGGGCTTGCTCCTGAGTGTGTGCACACATATTACAAATATGGGTGTGCACTTTTATACAAGGCTCAGGAGGAAGCTGATCCTTTAGCTGATGTGCCCAAGAAGGAGGATGGATCTCAACATGGCTCCAACAAAGATGGTTCTGTGAAGGGTTCTTTGAATGCTGAATCTTCCACAGCTTTCTTTTTCAA | |||||||||
gi|208144300|gb|GD941155.1|GD941155 454GmaGlobSeed683804 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA AAGAAAGCTGTGGGAGAATAT EST sequence (targeted fragment marked with yellow): AATACTGCGTTCCTATATAATCAATACATCTTGGCCACTTCAAATACACAAAAGGATCAACCCAGGACAATATGTTCCCCAACTGCTTTCTTCTGCATTTGAAGCTGTTGTTGCATAGATATTCAG | |||||||||
gi|298194642|gb|HO043114.1|HO043114 ocpsga0_0469_F07.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN AAGAAAGCTGTGGGAGAATAT EST sequence (targeted fragment marked with yellow): GGGGAGGACACAAGACGATAACAAATGGCATCACCTCAGTCGAGGAAGAGAGTTGACGCCGTCGATTCTCGCGCTGCTTCCGTTCTCGTTCGCGCCAAAGATGGCAGTGCTTTTGCTCGTTGCGACGATTGCAAGAAGAATGTGCCGGTTGCACTCATCGACATGCACAGTTGCAGCCTTGAAGCTAAAATTAAAATGAACCTAGACGCTCAAGTTGTGGAACAGGCTGCTGAAGCTAAGAAGCCGGAGAGGAAGAAGCCCAAATCTAAAGAGCCTATGGCGAAAAAAAGCTAAAGTTGGGAAGGGGAAGAAAGTCAATGATCCTAACATGCCTAAGCGTCCTCCCACAGCTTTCTTTGTCTTCTTGGATGATTTTAGAAAATCTTTCAAAGAAGCTAATCCTGATTCTA | |||||||||
gi|213592288|gb|DB983022.1|DB983022 DB983022 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult AAGAAAGCTGTGGGAGAATAT EST sequence (targeted fragment marked with yellow): GGCTATATAAAGATCAAGGTTGAATAATGAAAATTTTGTTACAAGAGGATTTCCAAACTCTTATCAAAAGAAGATTTTCCGACATGCATAAACGCAGTTCATAGTTTCATATATATATATATTTTTATAAATATCATATGGTGATGAAGGTGGCTAGGCCTCTTCATTGCAGATACACACGACCTCTAAGCATGGCCCCTATAGCTTCCAATGCAGAATGGTGGCCACATCTTTAACTTAGGGAACCAAGATGAGGTCATTGATAATGGTTGATGTTCATACGGAGAAAGAGGATGCAAGGCCAAACTGAAGGCCCCAGAGCTCAAAAGATCCCTTAACAAAGTCATAGTATCCTCCTTTTAGTGACAATGTCTTGTTCACCAAGCCATCTCTAACAAATGGGTATGTTAGCAGGTTTATATGATATTTATTCACAGCTTCCTTCTCACA | |||||||||
gi|192321049|gb|FK012417.1|FK012417 GLQAL19TF JCVI-SOY2 Glycine max cDNA 5', mRNA sequence AAGAAAGCTGTGGGAGAATAT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTAACTTTCTAACAAGATAGGATTCTATACACATAATTTTAATGAATGTTTTTAAACAACACATAAAAACTCTATTACATATATTGAAACATAACAGTCCAAAGTTTAATTAACTCTACGCAATACACATTCACCCACTCATTCTAAAATCTCAATAATCAATGTTCAAACTTACACGATGCAAATGTAGTACACACAATCATGTATCATTATTTCATCATCCATAGTGGCTACGATCTGAAAACCAATGCACACAAATGCTTCACCCCTTGTACAAAATTTATTGATATTAGTGTAATTTCTTTGATGGTATTTAATTCTTTACACTCAAGAATGGTTTGAACATTAATAGTACTCCAAGTCCTTCAACAATATTCAGGGCAAGGAAAACAATATGGGTGCCTGGCAGGAAAAAATCATTTATATGCTTTTGTGACCAAAATAATAATGCACCGGCACTAGCAGGACCGATTGTTTTGAATATTGACATACCCGTCATAGCGATACTATTAGCTGTTCCCCTTTGATGTTGTTTCACAGCTTTATTTTGCAGAAGGAATAAACTAGTTGCAATTGTCTCAATCATAACATTCTTCAGAATGG | |||||||||
gi|213606859|gb|DB961042.1|DB961042 DB961042 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult AAGAAAGCTGTGGGAGAATAT EST sequence (targeted fragment marked with yellow): TCAGGACACAAGACGATAACAAATGGCATCATCTCAGTCGAGGAAGAGAGTTGACGCCGTCGATTCTCGCGCTGCTTCCGTTCTCGTTCGCGCCAAAGATGGCAGTGCTTTTGCTCGTTGCGACGATTGCAAGAAGAATGTGCCGGTTGCACTCATCGACATGCACAGTTGCAGCCTTGAAGCTAAAATTAAAATGAACCTAGACGCTCAAGTTGTGGAACAGGCTGCTGAAGCTAAGAAGCCAGAGAGGAAGAAGCCCAAATCTAAAGAGCCTATGGCAAAAAAGGCTAAAGTTGGGAAGGGGAAGAAAGTCAAGGATCCTAACATGCCTAAGCGTCCTCCCACAGCTTTCTTTGTCTTCTTGGATGGTTTTAGAAAATCTTTCAAAGAAGCTAATCCTGATTCTAAGGATGTTAAAAGGGTTGGTAAAGAGGCTGGTGAAAAGTGGAGGTCTATGACTGATGAAGAGAAGAAGCCTTATCTTGACAAAGTTGCTGA | |||||||||
gi|192326958|gb|FK015170.1|FK015170 GLNBX44TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence AAGAAAGCTGTGGGAGAATAT EST sequence (targeted fragment marked with yellow): CTGAAGCTAAGAAGCCGGAGAGGAAGAAGCCCAAATCTAAAGAGCCTATGGCAAAAAAAGCTAAAGTTGGGAAGGGGAAGAAAGTCAAGGATCCTAACATGCCTAAGCGTCCTCCCACAGCTTTCTTTGTCTTCTTGGATGATTTTAGAAAATCTTTCAAAGAAGCTAATCCTGATTCTAAGGATGTTAAAAGGGTTGGTAAAGAGGCTGGTGAAAAGTGGAGGTCTATGACTGATGAAGAGAAGAAGCCATATCTTGACAAAGTTGCTGAGCTTAAGGAAGAGTACGAGAAGGCTATGGAAAGCTATGAAGCTGGTCAAGATGAAGAAGATCAAACTGTGTCTGCTAAGGAAACTTCTGATAAGGAAGCTGCTGCAAAAGAAGTTGCAATAGAAGTTGAAGAGGAGCTAACTGACGAGGACTAATGGTTGCATTATGGGCACTCCTTGAACTTGATAGCTATTATTCTAAAGGGCCACATAATTACTTACG | |||||||||
gi|192327771|gb|FK022386.1|FK022386 GLRA684TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence AAGAAAGCTGTGGGAGAATAT EST sequence (targeted fragment marked with yellow): GGATTCTCACTAGGACACAAGACGATAACAAATGGCATCATCTCAGTCGAGGAAGAGAGTTGACGCCGTCGATTCTCGCGCTGCTTCCGTTCTCGTTCGCGCCAAAGATGGCAGTGCTTTTGCTCGTTGCGACGATTGCAAGAAGAATGTGCCGGTTGCACTCATCGACATGCACAGTTGCAGCCTTGAAGCTAAAATTAAAATGAACCTAGACGCTCAAGTTGTGGAACAGGCTGCTGAAGCTAAGAAGCCGGAGAGGAAGAAGCCCAAATCTAAAGAGCCTATGGCAAAAAAAGCTAAAGTTGGGAAGGGGAAGAAGGTCAAGGATCCTAACATGCCTAAGCGTCCTCCCACAGCTTTCTTTGTCTTCTTGGATGATTTTAGAAAATCTTTCAAAGAAGCTAATCCTGATTCTAAGGATGTTAAAAGGGTTGGTAAAGAGGCTGGTGAAAAGTGGAGGTCTATGACTGATGAAGAGAAGAAGCCATATCTTGACAAAGTTGCTGAGCTTA | |||||||||