| mature miRNA: AATGGGACGGAGGGAGTACAA species: Ocimum basilicum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|87069615|gb|DY339932.1|DY339932 OB_SEb01E06.r OB_SEb Ocimum basilicum cDNA clone OB_SEb01E06 3', mRNA sequence AATGGGACGGAGGGAGTACAA EST sequence (targeted fragment marked with yellow): TGTCGCCGCTACTTGCCGACGTCGTCTTGCCTCCGATGATACGATGACGTTCTGGCTGCGGTCGTTGGGTCGTCGCTGCGCCATTTTGTTGCCATCATTTTTTTCTTTTCAGCCCGTCAATGCTTTCCCGTGCTTTGGCTACGTTGTTCCCATTTCTATATGGACTAAAATGGATTCGATGATTATCAGCTACTTGGATTTGAAGAGGCTGAATGTAAAAGTTTGTTCTCAAGAAATACAACAAGTATGAATCTAAATTGTTAGCTTTTTTTTTTTTTTCTAGAATTGTACTCCCTCCGTCCCATTTAAATTGTCCCACTTTCCTTTTTGGTCTTTCCCATTTATTAGTCCCATTACCAAAAATGGAAAGGATTTAGTGGTTAGAATTCATCAACCTCACTCCTCCACCCACTCACACCACTAATTTTCTTTTTCCTTGATACCCGCGCCTAAAAGTTTTGGGACAATTCTCGCGGGACGGAGGGAGTAATAAATAAAGTGGGCTACATTGGCCAAATGTTGCCCGCTGACCGCTGTATGTAATCTATCGAAATTAGAGAGTTAGCTATTGAGAGATACAAGGAT | |||||||||
gi|87071448|gb|DY341765.1|DY341765 OB_SEb05L15.r OB_SEb Ocimum basilicum cDNA clone OB_SEb05L15 3', mRNA sequence AATGGGACGGAGGGAGTACAA EST sequence (targeted fragment marked with yellow): GTGGGGGCCGCACCAGAGTTTTTTGCGTAATCAGGCCATACAATTAGGAAGAGGGGTGGAGATGGGAGAAGCCCACGATTTCGGTGGTATGAAGGCTTTGGGGAATGCTCACTCAGCCAATGTGTATGAGAACATCAACATTCAGAACCGCAAGCGATTTGCGGCGCAGCTGTTGCCGGACTTTGTAGCTTAGTTCGGTTGGTAGATAGGCAAAGAAAGGTATTGCCAAAGAAGGTATAACTTGTAGGGGCCTCTACAGGATTGTGTAGAGAATAGATAGTATAGTGATATTTATTATTATATGATGATATATGAATATGTATACAAGCATTTTGGAGAGAAGCGTTGGGCAGGGCAGGGCAGGGCAGGGCAGCTAAGGTTGTTAGGGGATATGGTTGGGGATTGTATATTAATTTTGTTTCTGCAGATAAATAGATGATTGTGGTAATATTGTACTCCCTCCGTCCCAGTTAAATTGTCCCATTTTCCTTTTTGGTCTGTGCCATTTATTAGTCCCATTACCAAAAATGGAAAGGATTAAGGGGTGAGAATTCATCCACCCCACTCCTCCACCCACTCACACCACTAATTTTCCTTTTCCTTGGTATGTGTGCCCAAAGTAAAGGGGACAATTTAGCCGGGNCGGAGTGGT | |||||||||