| mature miRNA: AGAGAATGGGAGAGAGTGCGT species: Citrus sinensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|188435869|gb|EY702859.1|EY702859 CS00-C3-701-013-B03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGGACTCGGCTTTGCTCATCTTCTTTGTCACACGCACTCTTTCCCGTTCTCATTAACCAAACAGCTCTCTCCACGAAACTCCTCCGGTTCAACCGACTCTACTCGACCGCTCGGCTCTTTTCCTCCCCGAACAGGACCAACCTTCCACTTCTCACCCAGGCCAAACGCCGCTACGGCTTCTCAACCAAAGAAGACTCAGTTGCTTCCCCTGCTAATCTTCGTTTTGAACGGCCACTAAAAATTGTGGAGTATCCGGACCCGATATTGAGAGCGAAAAACAAGAGAATTGATACATTCGACTACAACTTGAAGAAGTTAGTTGACGAGATGTTCGACGTTATGTACAAAACTGATGGTATTGGGCTCTCAGCGCCGCAAGTGGGAATCAACGTTCAACTTATGGTGTTTAATCCAGTTGGTGAGCGCGGTGAAGGGGAGGAAATTGTTCTTGTAAATCCAAGGGTTAACAAGTATTCGAACAAAATGATCCCTTATGAAGAAGGTTGCCTATCCTTTCCTGGAATCCATGCTGACGTAGAGAGACCAGAATCTGTGAAAATTGATGCACGGGACATTAATGGTGCAAGGTTCTCAGTCAGCTTGTCAGATCTTCCTGCACGGGGTGTCCAGCATGAAATTGATCATTTGCAGGGGATTCTTTTCTTTGAGAGATGACTGATGATGTTCTTGACAGTATTCAGGAACAGTTAGAGGNNCTTAGAAAAGAATATGNAGGATAGACTGGACTTCAAAGCCCTGAAAAGATAGAGCACGTAAAAGGAGAAAGCTGCTGTTGTTTTTGGAAATCCTAAATGATAGGGTGATTTGGCAGGGGATTGACATATTCATAACGTGCTTGCTGACCGATCATGAACAAACCCTTTGCAAGAAATGTAGGGGCACCCAA | |||||||||
gi|188302823|gb|EY702967.1|EY702967 CS00-C3-701-014-C12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): TTNNNTCATGGTACCCTGCTGTACCGGTCCGGAATTCTTCATAAACCGAGTGTCCGCCCACGCGTTTCCCAAAAAAAGACTTCTTGCCGTAGTTTGTTCCATGGCGTGATAGATACTTTGTTTTACCCACTTTGAAGCAGGGCATGAAAATAAGTTTCAATTTACCTATAAGAATTGGGATTTCTTTCTTTGGCATTGGGAAGGGATATGGAGAACCCATTCGTGGGTAGACGATGAGAGCTCCGTAGACAGTTGCTCTGAGCCATCTGCTATGAGCATGCCACCACAAAGTTCCCTCTTGGTCTTCGATGGTGAATCGGTATGTGTAACTCCTTCCCGGTTGGATTGGGCACTGTGTCACATATTCAGGACCATCTGCCCATGGATTTCTCGCCTGGCGCACTCCGTGCCTGAACAACAACATTAGGCAACAATTAATATTGAACAACGCCCTCTTTCTCATTCTTTGACAAACACATTATTATATGCACCTGGCATACAAGCATACCACTGGTAGGTGACTTTTTATCTACGCCTGGTTCTACCCCTGATGGACACGAGCGTCCCCATTCCAGCTCGCCCTGGTGGTCCTGGGAAACTGCCACTACTGCAACACTGCCATGCCTCCTGCACAGCCTCATTTACGGGTCTTTCTTTCATAATGATTTATCAAAACCAAAGAAGCGAACTCCCCGACCCACACGCCCATCATTGACGACTAAGCAATGAAATAAGGAGAGCCAGGAAAGTCAGGGTGCGCGACGATCCCCCCTAAAAATACAATCCACACAGGAAACATCAACCAAGATCCTCATACCAGGCAAAAACCCCGCGGGCTCCCCGCCAAGTATGCAACGACCCATATGTGCCTTCCACCCCGTCGCGCAGAGTGTGGCAGTCAAATAAGGGCCACACAGGCGCCCGACTTAAACAAGGGAAGAAAGGG | |||||||||
gi|188305964|gb|EY672610.1|EY672610 CS00-C1-102-102-B08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGAAATCCCATTGGTTATTGCGTTTTGTCCAAGTCTTCTTGGAAGTCTTTGGATGGACTTGTAAATTGGGAGTCTCGCCAAAACGGGACGTCGTTTTGAGGGCTTCTATCCGTCGATCTAGCTACCCATCTGTTCCTTGAAATCCATCCAATTTTAAAATCAAAACCACTCCGGAGCTTAATCGATCAACTAATCCCGGATCCTGTAACGATGGCGACATCGAACGATAAATTGCAGAAGATGGAGCTCCGTCAAAATTACCAGAATCTATGGCACACTGATCTCATGCATACCGTGACTCAAGATCCTCCCTATTGCTGCTTTTCTTGTCTCTGTGGACCATGTGTATCCTACTTGCTTCGGAAACGGGCGCTCTACAATGACATGTCCAGATATGTTTGCTGTGCAGGGTACATTCCCTTCAACGCTCCCTCTCCCATTCTCCACTGCTCTGCACTACAGCTCGAGGAACCAACATCTCCACCCCCCCATCAAACTCTTAGACCCCGCAGTCTACCCCCCGCCGTGCTAGACTGGCCCCAAACTTTGACCGCCCGCGACCGTCCTCATCTCCCCGGCGCGGCCGAGCCGACGCTTCCACACAAACAAGCACTACCCCGATGCACCACGAATCGTCGGTCCTTCTTCCGGATCACCCTGCGGCTACGGCCAGCCGCCGAAGCCGGCGGAGCGGAGCAGCAAGTAGACCATAACGCACATAACCCAGAAACCCTCCCGTGTCTGTCGGCCCCCGATGGCACCACCTAATTATAGCACCGTAGCAGACGCACTCCTACTCCATACTGTATCACCACATGCGNCACGCCAGGCGTTGCCTTATTTAGTACCCGCCCGCGGGATCGCAGTATCGAGAACCACCAGCGCG | |||||||||
gi|188319672|gb|EY652964.1|EY652964 CS00-C1-100-039-A12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequ AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): TTCACGACCCACGCGTCCGCCCACGCGTCTGACTAGATACTAGATCGCGAGCGGCCGCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGAAAGGGAGATCCCTTAACCCCAACCCAACCCGGAAAATTTTCAAAACTATACCCCTCACTTGGTAAAAAAAACAGGGGGTTTCCTTAAAATCTTTAAAAAGGGATTTAAAAACCTATTTTCAAAAACCTATTTGGCCAGGGCTAAAAAAACCCCCCAAAAGGGAAGAATTAAAGCCTTTTGGGGTTAAAAAGGGGGCTTTTTGGAAAAAAAACTGTTTCCATCAGAGGGAAGGTTGGACATCTAAAAAAGGGGGGGGGGGAAAACAAAAAAAGTTTCCCCAAAATTCTTTTAAAGCCCAAGGGGAATGATAACTTTGGGGGGGGTTTTTTCCTTCCCCACAACTTCATTTGGGTTACCCCCCCCCCCCCCCCCTGGGGGGTCTTCCCTGCCGAGGGCCCTTCTTTCTCTCTTTGGATCCGGGCTAAGGCACGGGAAAAGTCCCCCCCTCTTTTTTGCGGGGCCCCACCTTCCCCTCTTTGGAAATTTTCCCCCCTCCCCCGGGGTTCTTAAAGGATTTTCTCCCATTTTCTTTTTTTTTTGGGGGGAGTGGGGGCCCCCCCTTTCCCCGCACCCAGAATAAGACTTTTCTTTTTTCTTGGCAGGGGGGAATGAGGATATGGGGAAACCTTGGGGCGCCCGCTACAAAATCCTGGGGTTCCGGGCAAACCCGCAAAGATCGACCGCCCTTACAAGTTTTATGAAGCGCTTTCGCCTCGGGGAGGGGTCCTTCTTAGGGCCCGCTCGGCCTAAAG | |||||||||
gi|188377061|gb|EY679407.1|EY679407 CS00-C1-401-059-H03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA se AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): TGGTTTTTTCGCCGTACATCAAGCCTCATATAATCAACTGTTTGTTCCAAACCTTACATAAAAATCCGAAAATGGCTGGATCCGGTGGAAGTGTTCCTGCTCAGGCTACTGATTTCTCCTATGAAGGTGACAATAATAACGTTATCGCACTAAAGCCTTGAACTATTTCCTGAATTTCCACCTCAGAAAGTAAACGAAGCACACTACAACTTCTGCTGCAAGTGCAACCCCTGCAACTGCATCCCGTGTAACTGCCGCAGATGAAAAACATATGCTCCTTACTTCATATATATTTAATTATTAAACTGTCTGTTTAATAATTATATATGTATCTTTTATCTTATGATCTTATAATTAATCTACTAACTATGATCTGATTCTGCTAAAATGATAATATAGACGAAAAAAGGCGCAGCTAACGGCAAACACGACCACTCTCAACAAATCGACCAATGTCTTTTATTTGTATTTCTATATCTAACAACTACATGAACAATAGTATATTCATGTATCTATTTATTGTCTCACATAACCTAGCTCTTTAGTAGAATCTAATGATTACCTACATATTGGTTTTTCTTTATATATTATACTTTGATTCCTACTTACAATGTATTAATTCAGCTAAACATTATTATCATAGATCTATATTCTTTTCTGTCAATCAATGTTCGCTCACTCTATCACATTCTCTATTTTGTATATTTCCCTTAATTTCTAGCCTTGGTTCGTTGCAGAAAAACTAAAATTATAGTTTCTGTGTATGGTTGTAATTATTGTATATAGATCTAGTAATCAACATTCTAAAATATGATTTGATTGACCCTGACATGGCACGCTGGCGCACAGGTTACTTTGATCTTTCTAATTCTCTTTTTCTCTTATTTCCATGTTATTGTCCATATTCATCCTCTCTCTTTCATATACTCTCTCTATGTATTTTTATATTAACTTTTGC | |||||||||
gi|55393760|gb|CV713114.1|CV713114 UCRCS08_0002F15_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensi AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTAGCAGCAGAAAATACGACTTCAACTTAAATTCATTCCATCAACGTATAAACTCAAGAAGATTGTAGTTACAACAAACACACAAAAGGGCATAAATACCAGAATGGCAAAAAATATTTTCAGATATAAAGAGATACAAAAATTAAAGAACTCCAAAAAAGGGGTTATTTATTGCAGAGGTCAGCTCAGAGCCTGCTGAATTGAGCACCGCCATGTCAACCTTCTCTCTTGGTAGAAACAAGAACTCACCCCCTTCGATTTTCTCAAATCCGCACAGCTCAAGAAACTCTAATCCCCCCTTCAGTGCACCAACTCTATCCTGAAAAGTTTGATTACTGAGTCTGATTTTTCTGAACTTCTCCTCATTAGGATTTTTGGCAACATTCCCTATATATGTTAGAAGGGTCTGGAATGCTCTCTTCACTTTAGCATCATCATCCTTGTGATTTTGTTTAAGAGATCGCAAACACTCTCTCATTTGCTCTACCTTTGTGGCAGGCCTAATAGGCAACATGCTCTTTTTCTCCTCGACAACGGGTGCCGAAGATTTCGTGGTTGCAGGATCTTCTGGGGGCAATCCAAGTCGCCTCCTCCGTTCTGCCTTATCTTCTTCCAATTTCTGACGAATTTTTTCCCTAGCTCTTTTCTCCTCCTCTTTCTCAGCTTTCCGCAAGGCCAATATTCGTTTCCTTTCATTTTCTTCCTCAATCCGTTTTGCTTCTAGCAGTTCCTTGCCTATTCGAATTCTTTCCTTTTCCCTCTCTCTTTCCCATTCTCTTTTC | |||||||||
gi|188348589|gb|EY671118.1|EY671118 CS00-C1-102-094-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGCTAGTTCTTTCCCTTCACGTAACTCTCTCTGGCTCTTCACTCTCTTTCTCTCTCTGCAGTTCAATGGAGCCATGGCTCGACGACTTAGCCGACGATTTACAGAGCGTGAGTTTCACGTCCACGAACACGACCGCCACAACGATCAACCGCAGCACAAGCTCGGGCTCCTTCGACGCCACCGCCTCACTCACCCCGGCTCCCTCCGCTCACAGCTCCTTCTCCTCCAAACCCAAATCCACCACTACAACAACTCACTCTCTCTCATTCTCCGACATCCGCTTCTCCCTCCGCATCGGCTCCGGCGACATCGGCTCCGTCTACTTAACCGAGCTCAAAAACCAAGACAGCAAAAGCATTAACAACTACTCTCTCTTCGCTGCTAAAGTGATGGACAAAAAAGAACTCGCTTCGAGAAGCAAAGAAGGCAGAGCAAGGACTGAGCGGGAAATTCTGGAACTGTTGGACCATCCATTTTTGCCCACGCTTTACGCCAGTATAGACTCGCAGAAGTGGCTCTGTTTGTTAACGGAGTTCTGCCCCGGCGGTGACCTCCACGTCCTCCGTCAACGCCAGCCTAATAAACGGTTCGATGAAGCCGCCGTCAGATTCTACGCATCGGAGGTGGTGATAGCGCTAGAATACCTTCACATGTTGGGGATTGTCTACCGTGATCTGAAGCCAGAAATGTGCTAGTTCGATCAGACGGACACATTATGCTAACGGACTTTGATCTGTCGTTAAAATGTGATGATTCTGCATCAATGCTCAGATTATTTCTGATCAAAACCCCCCAATGGCGGGCCTACAAAATGGAGATCCAGGTGAGTCTCCCTCATTCACATTCGGCGTCCGGGATTATTCCTAATGGCATTGTCCCTGGCCGGGCATGTGTTTCAAC | |||||||||
gi|188353156|gb|EY661726.1|EY661726 CS00-C1-101-036-C11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGTGACGGAGTTGCCACCCGTCTGTCAAAACCCAAGCCGATTCACGGATCCGTTAACCAACGCATTCGGATCCTTGAACGACCTCGTACCGGACCTCGCATCTCTCCAAGACCTCGCCACGCGCGGCTCCTGGCGCACAATCATCGACAATGTCTCACGCGCCCGCTCCCAGTCTCTCCTCACGCAACCCCACCACCACCTCACTCATCTCGCCTACAACACCCTCGCATTAATGAAACTACGCCGCTTCGATGAAGCCCAACAAGAGCTCGACTCTCTCGAAGACTTTAACAGCTCCGGTTACCAATACGAAACATATCCTCATATTTACCCGAACCGGACCGGATCCATGGTTCCCTTCTCTCTCCGCTGGCTCTACGCGGTTCTTCCGATTAAGTTATCGAACCGGCAAGTGGGTCTGGACCGGTTTTATGAATTGCTTGATTTCGTGAGAGAAAAGTTGGCACGAAAACTAGCTGAGAAATTGGAAGAATCGGTGAAATCGTGGAAGAAAAGAGAGATTTTTGTTTTGAATTGTTTGATTGGGTATCATTTGAGTAGTAAAGAGTATAATGTTTGTTTTGATTTGATGAATGAATCGATTGGTCGAGGTAATGGTTTGGACCCGATTTTGGTTTCGAAATTAGGGTTTATACAGATGCAAGTTGGGGATTTAGAGGGGGCAAAGAAGTCGTTTAATCGAGTGGAGGGAATGTTAAACGAGGGGAAATTTGANGGATGGGTGCTGAGTGAAGTTGAGTTTAGGAACCTTGTCAGTAGAATAAGCATTGATTNNATTGGTGGGGAAGATATGTATCTGCGGTGAAGAGTATGAGGATGTATAGAGAGGATTATATGATATTGTGGGATTATAATAAGGCGTGTGTTTGATGACTTGAGGGATTG | |||||||||
gi|56588920|gb|CX074930.1|CX074930 UCRCS08_41D11_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): TTTTTTTTGTCATTAGATCTTAAGGAAACATTATAGAAAGCCAATGGCATAAATAACTCAAAACTGGGTTAACAAATGCAAAAACCGAAGTAATTATACATTTAAAGAAGACTAAAACATGAAGAACTGGTAAGTCTTCTGCATTCCTAGATGCATCTCTCTCATTTTCTGGTAAGCAATTCGAGTTCGAAACCTTCTGGTAAGATATACCTTGACATCACACATCAAAAGCTAAACCACGTAAGAGAATCTTTGCAAGGGAGAGCAGCTTTCTATTTCCTTTTGCCCTTGACTGGGACAATCAATCCTCTCTTCTCTAGACTCTTAAACCGATCCTTTACAAGGGTGCAACAACCCTTGAGCTTACGGAGAGACCCAGTTATTTCTTCAGATAGGAGGACTTGTGTAGGAGCCGGCTCAAATTTGTGCTTTCCCAAGCGTGGCGGGCGAACTTTTAGTCTTTCTTGCATAGCCACAACACGCCTTATATGTCTTTTTTGCTTCTCCTCATCCTCTTTCGTTATTTCTTCAATAATATTCGGCAAGCTATCAATTTGTTTAGAAAGCTCCTCCCTCTTTTTTGCTTCTGCTTCTTTTCTATGCAGTTCCTTGTGTCTTTCTCTCTTATTCAATTCAACCCGGGTGACCTTCTTTGTTTTTCTAGATCTGTTTTCATTTCCAGTAGCTTGATTTTCGCTCAAATTCTCCACATTTTCATCATCGCTTCCATTATCCACCTCAAGAAAGTACCTATCTTCATCGTTAATAACTTCTCCTGGAACGGTAATTGGAACTGGTTCAGGACCCAACTCCTTTCGATAGACTTTCTGCATCTCTTCTGCCACAGCTTGA | |||||||||
gi|46208136|gb|CN183199.1|CN183199 UCRCS04_0003K10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_RE AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): CACGTTTTCCCTCACTTTCTCGCATTCTCTCTGCTATGTGAGTTCTCTCTAAGCACTAAGCTCGAAATATAAAATATTTGAAACGCTATGGATTTAGCTGAAGGAGTCGGAGAAAGCTCGTCGCCGCCGCGTAGCTTTGGAAGCTTCAGCAACTACGATGTGCGAAACGACGTGTTTAATCGGCTGATAGAGGCCGGTAATGAAGAGGCTGTGTGTAATCCTGAGTTTCGAGAACAATTAGATGCTCACTTCAATCGATTCCCTGCTAGTTATGGGCTTGATGTTAACATGGATAGAGTGGAAGATGTTTTGTTACATCAGAAGCTGCTTGCCGTTGCAAAAGATCCAGAGAAGCGGCCTGCTTACCATATCCGTTTCATCGAGTATTTCTACTGCAAGGCCATCTCTCGATGCAGACAACGAAGGAATTGTACCATCTCAAAAGAGAGTCAGGGATTCTGCAACTGACTTCGAGCCTTGCTCTAAGCTTGAAGACCTCAATTTGGATAGAAAGAATTCCATTGACATTGGGGAAAGATATGCGGCAGAGAACTCCTCTAGGAGGCAAGAACTTGTTCCCATTCATGAAGTCGTATTTTCTACAGTTGACAAGCCAAAACTTCTTAGCCAGCTTTCTGCCCTGCTTTCTGATATTGGACTAAATATCCGTGAAGCCCATGTATTCTCTACAACTGATGGCTACTCCTTGGATGTATTTGTGGTGGATGGATGGCCTGTTGAGGGATCT | |||||||||
gi|188472849|gb|EY709039.1|EY709039 CS00-C3-701-105-E10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): TCCCGGGTCGACCACGCGTCCGCTCTCATTCTCTTTCTTTCTCACTCTCTCTCCTCTGTCTTTCTCTTTCTTAGGTTTGTTTCTCTCTCCTCTCTCTTCTCTCTCCCAATCTCAAAGGTTTCTCTCTCCTCTCTCTTCAGAAGGGCAAAACCCTAAAGAGCCGTTTACAACACCCCAACTTTTCATGGATGATGATGCGTTGAACATGCGCAATTGGGGTTACTATGAACCGTCCTTTAAAGGGCATCTCGGTCTGCAGCTAATGTCGACAATGCCTATGGTAGACCGAGACACCAAGCCTTTTCTACCTGGTCGGGACCCTAATATTATGATTGGTGCCAATGGTGCCTTTCATCCTCGGGATTGTGTGGTTTCCGAGGCATCTATTCCCATGAACTACATGAGGGATAGTTGGATCAGTCAGAGGGATAAGTTTTTGAACATGCTACCTTCGAATCCTACTTTTGGGGTTCTTCCAGAAACTTCTGGAGCTCACTCCTTGCAAATGCTACAGCCACCACCCAATATGTCAAGGGATGACAGATTGGCCCCTGATAGAGTGGCACCTGACAGAATCGTGCCTAAAGTCGAAGAACCAGTTGTCAAAACTGAAGGTGCTCCGGTAAAGAAAAGGCAAGGTGGGGGTGCCTCNAAAATGCCGAAAGCTAAGAAGCCTAAGAAGCCCAAGGATAATAATGGCACTGCTGTGCAGCGTGTGAAACCGGCTAGAAAGAGTATGGATGTCGTTATAAATGGGATTGATATGGACATCTCGGGAATTCCTATTTCTGTCTGCTCATGTACTGGAGCTCCTCACAATGTACCGATGGGGGATGGGGGCGGTTGGCATCTGCTTGTTGACGACAATGTGTCATGTACCT | |||||||||
gi|188271698|gb|EY694562.1|EY694562 CS00-C3-700-026-H06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cD AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGCACATACCTTCACCGAATACCTGTAACTCTCAAAAACAATGTCGCCTGAAAAGACTATCACTCTGAACAGTTCGGCACTGCGAGACGTTCCCACGCGCACGCACACCCGCGTGCCTCGAGTAACAGACATCTACCCCGTGGTGGTAGGCACCACTGTTCCAACACCATAATCCCCGCTGCCGAATGTGTACTAGCTCCCATTCTCTCAAAGGGATGGATGCACTCGTCCTAACCACGATGCTGCTGGCCTCACGGGACAAGAAAGACGACACTGCTACCGATGATGATCTCAATACCTGTGATGCAGACTTCGGCAATCGTTGATAATAGTACCCTCTTTGACCTAATCGTGGACGCCAATTACCAGAACCTTATGGCACTGCTGGACTTGACCTGCCAAACTGTTGCACACATGATCTAGGAGAATACTCCAGAGGACATACGCTTGACCTTCGACATCGCCAAAGACTTCTCTCCCTATGAAGAAGACGAAGTTCTGAGAAAGACCCAATGGCTCATTCTATGAAAGACTGAACTGATGCATGCTCGNCAATTAATACTATAGATATGAATGGCCAATATAATGGACGTGATCTACTAATATGGAGCCACTAAGTGTCCATGATTCAACATCTGCATGATCTTATTGACTGCATCTGCTGACTGCTGCTCCATATAACCGACATTGAACCCTTGACTATTGTCTTGCTATGTAATTTCATTACAGNTCAATCTGGATGCCATGGGTGTGCTGCTCAAATGAACTGAGCTACATACCGATGCATGGCACTGCATAGGCCTTCTTTACGGCACCTAAGTAAATTCACTGGCGGTCTTCTACACGCGGGTCGGGTAAACCATGGATACCCAAATAATGGCGTTGACCAAACGCCCTTGCCACCTGCGAAA | |||||||||
gi|188332003|gb|EY691486.1|EY691486 CS00-C2-003-110-C08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequ AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGCGGACGCGTGGGTTTGAATGAAAGTCATTGGTGTTTTCGAATGGGAATTTTGCATTAAACAATGAAGAATAGTGAATAGGAAATTTCCTGATTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAGGAAGAAAAAAAAAAAACAAATATAAAGAGACGGGGGAAAGTCAATTAAGGGGGCCGTTCTTTTTAGAACGGGCGGGGGCTGGGACATGGCCTGGTCGTTTTCCGACTTAATTGCCGGTGGAAGCCCTCCCCCTTTCCCCAGCTGGGGTATTTGAAAAAAGGGCCGTTCTCGATAGCCCTTCCCCTCAGTGGCGATCCCTGATTGGAGAGTGGGACCCCTCCCTTTAGCGGCGGGTTTGGCGCGGGGGGCGCGGCGGTTTACCCCCCCCTTTGGAGGGGTGCGGTTGCGGGGGTTATAGGGCCCCGTTCCCCTTCCGCTTTCGTCCCTTCCTTTCTCGCCGCGTCCTCCTGCTTTTCTCCGGTCCGCTCTCGGTCCGGGGGCTCCGTTTTCGGCCCCCGAATTTTTTGGTTTAGGGGCCCCCTCTTTTCGCGGGAGAATTTGTGTTTAGGGGGGGGGGGCCTACTGAGGGGGGGGAGTTTTTTTTGGGGGGGGGGGTTTTTCCCCCAGTAGAACTTTGGATTTTCAGGCTGTTTTTTTTCTGGGCTTGGGCGTTCCAAGTGAAAAATGCGTTTTTTCCCATTTTTTGGATTTTTTCCTCTTCCTTCTCTGCCGGGGGTCTCCTTTGGTTTTTGTGGGTGGGTGTCTTGTCAGGCGGGGTTGTGTGGTGATTCTAAGCTATTTTTCCGTATATTTTTTTTTTTAGTTTGTCAACAAGCTATTTTTGTCCGCATGGGGCACCCTTCTGGCTGGGGCAACGGCGGGGACGCGGGGCCCCCCCCCCTTTTTGTTTTTCGTCTG | |||||||||
gi|56538183|gb|CX053892.1|CX053892 UCRCS09_8H08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UC AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): TTTTTTTTTATAGAAAGCCAATGGCATAAATAACTCAAAACTGGGTTAACAAATGCAAAAACCGAAGTAATTATACATTTAAAGAAGAATAAAACATGAAGAACTGGTAAGTTTTCTGCATTCCTAGATGCATCTCTCTCATTTTCTGGTAAGCAATTCGAGTTCGAAACCTTCTGGTAAGATATACCTTGACCTCACACATCAAAAGCTAAACCACGTAAGAGAATCTTTGCAAGGGAGAGCAGCTTTCTATTTCCTTTTGCCCTTGACTGGGACAATCAATCCTCTCTTCTCTAGACTCTTAAACCGATCCTTTACAAGGGTGCAACAACCCTTGAGCTTACGGAGAGACCCAGTTATTTCTTCAGATAGAAGGACTTGTGTAGGAGCCGGCTCAAATTTGTGCTTTCCCAAGCGTGGTGGACGAACTTTTAGTCTTTCTTGCATAGCCACAACACGCCTTATATGCCTTTTTTGCTTCTCCTCATCCTCTTTCGTTATTTCTTCAATAATATTCGGCAAGCTATCAATTTGTTTAGAAAGCTCCTCCCTCTTTTTTGCTTCTGCTTCTTTTCTATGCAGTTCCTTGTGTCTTTCTCTCTTATTCAATTCAACCCGGGTGACCTTCTTTGTTTTTCTAGATCTGTTTTCATTTCCAGTATCTTGATTTTCGCTCAAATTCTCCACATTTTCATCATCGCTTCCATTATCCACCTCAAGAAAGTACCTATCTTCATCGTTAATAACTTCTCCTGGAACGGTAATTGGAACTGGTTCAGGACCCAACTCCTTTCGATAGACTTTCTGCATCTCTTCTGCCACAGCTTGAGCCAATGACTCCTGATGACTTTCGAACGTGGGATTGTATGAGCATCCTGAAGCCCTCACTTCCACAGCTGGAATAACTGA | |||||||||
gi|188264357|gb|EY737449.1|EY737449 CS00-C3-705-031-B12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cD AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): CACGCGTCCGGACGACGCATCCTCTCTCATTCTCCTGAACTTTAACTGAAGGTATCATTTTGACCTTGATGTAAGTAGTTCATATGGCCGGCGTCAGGTTCTCAATACTAAAATCACTTTGTAGTAGTTCCATCTATCCTTCTTTCAAACCACGATTGCTACATACTTCTAACTCTTACTTCAAACTCGCAAGATATGCTGAGCAAAAGCACGTAAAGCTATCCTGTGCAGTTGTGAATAACAACTACGACAACAGTCGGTTGCACTCCGCTTTAAATTCTATTAATAATCAACTTAAAGTTCATGGCTTTGCACCTATCGGTAAAACTCAATGCCACAAAGCCAATGCTGTTTCATCATATTTACCCACATCGAAAAATTTTTGCTCACGGAGATTGGCTACATTTGCTTCAATAAGCCCCTTCCTGGGCCATCGATCATATTCTTCTTTCTTTGGTAGCAAAACTGATAAATCTACAGAAATTGATGTTCCAGCTGCATCTAGTGGGAGTGAAACGGATGTTAGTAACCATGGTATTGTTGGAAGTGATTCCTTTGATAAAATTAAGGATGCTTGGAAGATGGTACTAAATGGGAGTAAGTTACACAGGACAAAAGGCTAAAGATGAACTGAGCCCACAGATTGAACAGTTGCTTGATGCACATCCATATCTTANGGATGTGATTGTTCCAGTTAGTTGTTATTTGACTGGAACTGTGTNGGTTGGGGTGGTGATGCTCAGGGGTTTTGAGGGAGATTCCATAAATATGCCATAAAGGGGTCCTGTTTCTTTACTATCTGGAAGGCTTATCCATCGAGCCAGTTCCTTATTACAAAATTTTTGGGGTGTTTTGTGACGGATC | |||||||||
gi|188375954|gb|EY738120.1|EY738120 CS00-C3-705-039-C05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cD AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGACGACGCATCCTCTCTCATTCTCCTGAACTTTAACTGAAGGTATCATTTTGACCTTGATTTAAGTAGTTCATATGGCCGGCGTCAGGTTCTCAATACTAAAATCACTTTGTAGTAGTTCCATCTATCCTTCTTTCAAACCACGATTGCTACATACTTCTAACTCTTACTTCAAACTCGCAAGATATGCTGAGCAAAAGCACGTAAAGCTATCCTGTGCAGTTGTGAATAACAACTACGACAACAGTCGGTTGCACTCCGCTTTAAATTCTATTAATAATCAACTTAAAGTTCATGGCTTTGCACCTATCGGTAAAACTCAATGCCACAAAGCCAATGCTGTTTCATCATATTTACCCACATCGAAAAATTTTTGCTCACGGAGATTGGCTACATTTGCTTCAATAAGCCCCTTCCTGGGCCATCGATCATATTCTTCTTTCTTTGGTAGCAAAACTGATAAATCTACAGAAATTGATGTTCCAGCTGCATCTAGTGGGAGTGAAACGGATGTTAGTAACCATGGTATTGTTGGAAGTGATTCCTTTGATAAAATTAAGGATGCTTGGAAGAGTGTAGTAAATGGAGTAAGTTACACAGGACAAAAGGCTAAAGATGAACTGAGCCCACAGATTGAACAGTTGCTTGATGCACATCCATATCTTAGGGATGTGATTGTTCCAGTTAGTTGTTATTTGACTGGAACTGTGTCGGCTTGGGTGGTGATGCCTACGGTTTTGACGAGATTCCTAAATATGCAATACAGGGTCCTGTTTCTTAATATCTGGAAGGTTATCCATCCAACAAGTCCTTATGAGAAAGTTTGGGGGGTGGTTGGAA | |||||||||
gi|188452162|gb|EY655170.1|EY655170 CS00-C1-100-071-F03-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequ AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGAACAGGACATTCTCTCTCCCTAAATTCGATACACTATGAAGGAAGTCCTCATAGCTCACGCTTTCATTATCTCTCTCTGAACTGCTCATTCGCTGCAATTATAACCTTCTCACATCTCACATGACTAATTTACCCTCCGCTCTCCGGCGAAACTCCAATTAAGGCCTCTCTCGGTTCTTCTATAGTCTAACAACAGTGAAAGATCCTTGGCTTTATCGTCCTCACTTTTCTAACCGTCTTCCCACGGCTTCCCTCACTTTCTCCCATTCTCTCTGCTCATGCGGAGCTCGTCTCTAAGCCCTAAGATCGAGATATTAAATATTTGAAACGCCATGGATTTAGGTGAAAGAGTTGGAAAAAGCTTGCCTGCCCCGCGTATCTTTGGAAGCTTCATCGACTACAATGAGCGAAACGACCTGTTTAATCGGGTGATATAGGCCGGCTGTGAATAGGATGCGAGTAAACCTGACTGTCTAGAACAACACATGCTCGCTTCTATCGATTACCTGCTAGTTATGGGCCTGATGCTAACATGGATAGAGTGCAAGATGATTTGTTACATCAGAAGCTGCTTGCAGCTGCTAAAGATCCAGATAACAGGGCTGCATTCCATATCCATGTCATCGAAAACCTTGCACCAGAACAGATGCGTATGATGCTCAACTGCTTGTCTATAGCCTCTCTACTGCAAGGACATCTCACAATGCTGACAACGGATGAATTGTACCATCTCAGAACACAGTAATGGATCTGGTACTGACTGCCAGCCTGACTCTAGCTTGAAGACTCACTTTGATAGAAAAATTCATTGTATTGTGCAAGATAGTCGCGATACTCTGCTAGAGCAAGACTGCCCCAATCAGAATTCCCTCTCTATGTGT | |||||||||
gi|219250129|gb|GE213483.1|GE213483 365 'BH' (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sine AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): ATTAGCGTGGTCGCGGCCGAGGTACTCTCTCTTATTCTCACTGAACAGCCGAGCTGCTTCAGAGTTTGCAGGAGAGTTTGGATTTGGATCACAAAGCAGAGACTGAATAGAGGTCAGTATAGCTGCAACATCATATATAGGACTCCACTGATTTTGTAAAATATCCAAACAAATACTTCCATCTGCATAGATATTTGGATGAAACATCCGTGAGACGAAACGAACTGTTGGGGGTTTATTTGGATAATCCTCTGTGAATTGTAGAGTCAACTTGAACGTACCTGCCCGGGCGGCCGCTCGAAAT | |||||||||
gi|46208652|gb|CN183715.1|CN183715 UCRCS04_0004G15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_RE AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): GCTCTCTCTCTCTCGTTCTCTCTCTTTCAAAACGCAAACGAAGTTTGGGGAAGCAATGGCATCCAAGCTGGTGCAGTTGCAATCCAAGGCTGCCGAGGCCTCAAAGTTTGTGGCCAAGCATGGAACTTCTTACTACAGACAGTTGTTAGAACAGAACAAGCAATACATTCAGGAGCCGCCAACTGTTGAGAAATGTAATCTTTTATCCAAGCAATTGTTTTACACTCGTCTTAGCAGTATTCCTGGGCGATATGAAGCATTCTGGAAAGAGCTTGATTATGTGAAGCACTTATGGAAGAACAGGCAGGAACTCAAGTTAGAGGATGCTGGTATTGCAGCATTGTTTGGGCTAGAGTGCTTTGCATGGTACTGTGCTGGTGAGATCATAGGGCGGGGATTTACAATAACTGGCTACTATGTTTGAGAGTTGCATCAAAAACAGCTTCTAAAGTTGAATTGATGAAAGCTTCCCAGCATTTTATATATTTGTTATTGTTCTGTCACCTTAACATACATGCTATAGTTTTGTGCTCTGCGAGAAAATTGAAAACCGAGATAGGAACAACTCATTTGTGTTTAACA | |||||||||
gi|188452362|gb|EY688564.1|EY688564 CS00-C2-003-089-E12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequ AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGCTTCCGCTCTCTCTCTCTCCCATTCTCTTTATAAGGCTTTGTAATCCAAGCTCTCCATTTGGGATTTGAGAACAAGATTTTTCTCTTTTGCTTTACGTGATCCATGGGTTTCCCAGTCGGGTACACAGAAGTATTCTTGCCGAAGTTCTTCGTACACACGCTTTCCTTTCTGGGTTTCATCAGGAACATCATTATCTGCTTGTTTCGCTATCTGGGACTATCTGATTTTCTTGAAACAGACGTCATTTGGCCCGACAACTCTCCGACCCGAATACCCGAAAACGCGCCTGTATCCGCTCGCCTGATCCGAGAAATCCTGCCAGTGATCAAGTTCCAGGACCTGGAGATGGTCAACGGAGACCCGCCCGAGAATTGTGCGGTTTGTTTGTACGAGTTTGAAGGCGGAGAAGAGATCAGGTGGTTGAGGAACTGCAAGCACATTTTTCACAGGGCGTGCCTGGACCCTTGGATGGACCATGATCAGAAGACGTGTCCGCTTTGTAGGACACCCTTTGTGCCCGACGAGATGCAGGAGGAGTTTAATCAACGGCTCTGGGCTGCTTCCGGTGTTGATGATCTTTTCAGTGAGGACAGCTCGGATCCGGAGTTGCAGAAATCTTTGTACGGTTAGAATTGATGAGATACCTACTTTAGGTTCGAAGAATTTTCGGTGGACGTGCTGGTAAACAGGAAAATTAGCGACGTACTAGTAAAACAATTTTAACAAATAACTGTAAGTATCTTACTTTCCTTTTAAAAAAAAAAAAAACAGGGTTTCCCCGGTCAAAAAGGAACAAAGGTTTAGCTCCCTCTTTGGGTGCCCACTTTTAAGCTTTTTTC | |||||||||
gi|188431150|gb|EY711776.1|EY711776 CS00-C3-702-011-F06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cD AGAGAATGGGAGAGAGTGCGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGCGGACGCGTGGGCGGACGCGTGGGGATGCCACTTTTTCCCATTCTCTTCTAGCTTTTATGGTATGGATGGCATGATGTCATGACACGAACATGACTGTTTTAATTGCAGAAGTCAGACCAAGATGCTGATTATATTCTGATGCCACATGTTCTGTAGACCAGGATTCAAATTCTGATGCACAATTGAACAACTCTGTTTTGAAGATCATCTTGGAGCTGTGATTGACACATTGACTGCCTGCTTGCGGTTCAGTCCATTTATTTGTTCTTGAAAATTGTATCATTGTTATCTGCATTCATCATAGTGTATTCACTGGGTTGTTCAAAAAAGGGCCAGCCTTCACCCATCATGGTTCCCCCCTCATTATACAACTTAACCCCACATCTTTTGTTTGAATCCAACAAATTGGGATGCCGTGGTTGTTTAAATGCAGCCATGTATATAATCATTAGAAACAGAACAAATTTGTTCATGACCTTTGGTGGGAAACCACTAGAGCTTCAAGTGTCAAATTGTACTGTTCACACATACTGTTTCCTATGATTGGTCTGATGCTGGCTAAAGCATGTCCATGCATAAACTTTGGAGCTCACCTGGTTTCATAATTTAAAATGGAGCACTTGAGATTTTTTATCCTCAAGGAAGATCAGAACTTTTGTTCCTTTTGTCTATCCTTGAGCAGATGAATGCACTNGAAGACTTGGGGTTGGACGTGACTAAGGGAGCTGNTACACCGAAGGATCAGTGAACAATCAAATTTTGTATACACGACTGAATCACTTTGCATGGGCGNAGCTTTTTGCGTAAAGCTCCAGAAAAAAGGTGTCTACTTTGAATTTTTTCGCTCAACAAACTCTGTTATATTTGCTTAATATTTCACTAGCTTGG | |||||||||