| mature miRNA: AGCCAAGGATGACTTGCC species: Glycine soja database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|11691260|gb|BF598928.1|BF598928 sv23f02.y1 Gm-c1057 Glycine soja cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1057-627 5', mRNA se AGCCAAGGATGACTTGCC EST sequence (targeted fragment marked with yellow): GCTGAAGTCCTGCAGTCTGAGGTTGGAATGTTAAATTCATCAAAGCAGACAAATCGAAGCAGTCCAAACATCTCTGGTTCAGAGGTGACTAGCATGTATTCAAGGGAAGGTTTTGATGGCTTTTCTGTCAATCCTCTTGGATCTTCCGTCCACTCTCTAGCAGACATGATAGGTAGTGAGCATGGTATCATTAGGCCCACTAAATGGGTTGCAGCAGTACCAGGTAACTGCTACAACCTTAAAATTTGATTTGTAAGGAGACTAGTGGGCTTGGTGCTGCGATGTTGCACCACCACCCTATCCTTGCAAGCGACCAGGTGAAGAAGTTCTTTTTCCGTTTCCTGTGTTCATTGTGACGAATTTTGTTTTGGAGGCGTGCCTCTACATCTGGTTTTAGGCAATCCATTCTTGGCTACTGCTTAGGCAACTCATCCTTGGCTCATTATATTAATAGTAC | |||||||||
gi|12493616|gb|BG045654.1|BG045654 saa04d05.y1 Gm-c1058 Glycine soja cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1058-178 5' similar AGCCAAGGATGACTTGCC EST sequence (targeted fragment marked with yellow): GGCTAATTCCTACTTATCCTTGCTTGTCTTGATCCTTGTAGCTCTGCTCCTCACCCCTCAAGGGCTTGCTGATGAATCTGATTCTTACTATAAGCCACCAGTTTACAAGAAACCACCAGTGTACAAGCCCAAGCCCAAGCCACCCATTCACAAGCCCAAGCCACCCGTTTACAAGCCCAAGCCACCCGTTTACAAGAAACCCCCTTATGGTAAGTACCCACCAGTTCAAGACAACGATCACTTCTAAACCATGCAACAAGGCATGTTAATGTTAACTATCTACTAAAATAAAGAGGTTCAGTTAACCTACTACGTACGTTGCTCCTTTTAATTCCTAAATCGTAATTTACAACTTTGTAGGGATGAGACATTCTTGGCTAGCTCTGCACTTCAATCCTTTATTTGTACAATGCTAT | |||||||||
gi|90027993|gb|DT083685.1|DT083685 53-SF76(PGEM-T-C13) Salt-treated full-length cDNA library of wild soybean Glycine soja cDNA, AGCCAAGGATGACTTGCC EST sequence (targeted fragment marked with yellow): GCCCGACGTCGCATGCTCCCGGCCGCCATGGCCGCGGGATTAGCTGTTTGACCGCATCATCCAGAGGGGCCACTATACCGAGAGGAAGGCCGCGGAGTTGACCAAAATTATTGTTGGGGTTGTTGAGGCTTGCCATTCCCTTGGGGTCATGCATAGAGATCTCAAGCCTGAAAACTTTCTCTTGGTCAACAAAGATGATGATTTCTCTCTTAAAGCAATTGACTTTGGCCTCTCTGTATTCTTCAAACCCGGTCAAGTTTTCACTGATGTAGTCGGCAGCCCATACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGGCCTGAAGCAGATGTGTGGACAGCTGGTGTCATACTGTACATATTGCTTAGTGGCGTGCCGCCATTTTGGGCAGAGACCCAGCAGGGTATATTTGATGCAGTATTGAAGGGACATATAGATTTTGACTCAGATCCTTGGCCTCTAATATCTGACAGTGGAAAAGATCTGATTAGAAAGATGCTGTGTTCTCAGCCTTCAGAACGGTTGACTGCTCATCAAGCTGTTATGTCATCCTTGGATATGTGAGAATGGAGTTGCCCCTGACAGATCACTGGGA | |||||||||
gi|11691260|gb|BF598928.1|BF598928 sv23f02.y1 Gm-c1057 Glycine soja cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1057-627 5', mRNA se AGCCAAGGATGACTTGCC EST sequence (targeted fragment marked with yellow): GCTGAAGTCCTGCAGTCTGAGGTTGGAATGTTAAATTCATCAAAGCAGACAAATCGAAGCAGTCCAAACATCTCTGGTTCAGAGGTGACTAGCATGTATTCAAGGGAAGGTTTTGATGGCTTTTCTGTCAATCCTCTTGGATCTTCCGTCCACTCTCTAGCAGACATGATAGGTAGTGAGCATGGTATCATTAGGCCCACTAAATGGGTTGCAGCAGTACCAGGTAACTGCTACAACCTTAAAATTTGATTTGTAAGGAGACTAGTGGGCTTGGTGCTGCGATGTTGCACCACCACCCTATCCTTGCAAGCGACCAGGTGAAGAAGTTCTTTTTCCGTTTCCTGTGTTCATTGTGACGAATTTTGTTTTGGAGGCGTGCCTCTACATCTGGTTTTAGGCAATCCATTCTTGGCTACTGCTTAGGCAACTCATCCTTGGCTCATTATATTAATAGTAC | |||||||||
gi|18728014|gb|BM524478.1|BM524478 sal16b10.y1 Gm-c1059 Glycine soja cDNA clone SOYBEAN CLONE ID: Gm-c1059-2371 5' similar to TR AGCCAAGGATGACTTGCC EST sequence (targeted fragment marked with yellow): TTTGCAATGTGGAGCCTCCAAAGATAGTCAGTGCAACCACTATGTTGACATCAGCTGTACCTCAGGCCCGGAAAGCATCCTTGGCTCGATTTTTAGAAAAACGCAAAGAAAGGGTGATGAGTGCAGCACCATACAACCTCGACAAGAAAGTCTGAAGAGTGTGCCACTGCAGAATACGCTGGTGCTAACTTTTCTGCCACTAACACTGTTTTGGCCAAGCAAGGATAGTAGCCTGCACCTTTAGGAAACAAAGTATTTCGGAGAAAAATATTGTTGTAACCTTAAAAATGTTGTAAGCAGATGCTTTTATTTTCGTTGATCACAACTTATGCTGACATTCTCGGGTTCAGCACATAGATAGGCCATTACCATAATTATTTTTGTGGTGTAGGGCTTTTACCTTGTTATTTGAAAGGTTGT | |||||||||