| mature miRNA: ATTAACTGAATCGAACCGATT species: Helianthus tuberosus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|125430579|gb|EL442551.1|EL442551 CHTM1922.b1_C01.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM1922, m ATTAACTGAATCGAACCGATT EST sequence (targeted fragment marked with yellow): GGGGAACGGAACCCACACTCACGTTGCAAGCAACCATGGTGGAACCAATCTGGTACACACACATCCTCTCAACCCTCACTCCCACTCTCTCCACCGCACTTAACCCCGCCGTCACCCACTTCCAACAATACCTCCGAATCAACACCGCCCACCCAGACCCAGACTACACCACCGCAGTCTCCTTCCTCAACAACTTAGCCACATCCATCCCCAACCTCCAAACCCGAACCCTCCACCTAACCACCCCTAACAAACCCCTCCTTCTAGTCACTCCCCCTGGCTCCAACCCATCACTCCCATCAGTCCTACTCAACTCCCACCTTGACTCTGTCCCTGCTGAACCATCCAAATGGTCCCACCCCCCTTTTTCCGCAGTCAAAACCACTGATGGTAAAATATATGCTAGAGGTGCACAGGATGATAAGTGTATTGCTATCCAGTATTTAGAAGCTATTAGAAACATTTTTCAACAACATCCCGGGTTTAAACCGGTTCGAACCCTTCATATATGTTATGTCCCTGATGAGGAGATTGGTGGATTGGATGGGATGGATAAGTTTGTGGAGTCTAACCAGTTTAAGGAAATGAATGTTGGGTTTTTTCTAGATGAGGGGCAGGCGTCCACCAACAATGAGTATCGCGTGTTTTACGCGGATCGGTCGCCTTGGGATCTTGTTATCAAGGCTACGGGCCAGCCGGGTCATGGGTCCAGGATGTATGATGATAGCGCCATGGAGAATTTGATGAAGAGTGTTGAGGTTGTGTCTAAGTTTAGGGAGAATCAGTTTGATTTGGTTAAGGCTGGTGTGTTGCCCAACTCTGAGGTTATTTCGGCTAATCCGGTTTATTTAAAAGCGGGGATTGATTCTGGTGATGGGAAGTTTGTGATGAATGTGC | |||||||||