| mature miRNA: ATTTGGGACGGAGGGAGTATG species: Aquilegia formosa x Aquilegia pubescens database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|71683402|gb|DR914039.1|DR914039 EST1105578 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1LB24, ATTTGGGACGGAGGGAGTATG EST sequence (targeted fragment marked with yellow): CAGTCTATGTTCTACTACACGCAAGGGCATTTACATACACTCCCTCCATCCCAAATTATAAGTACATTATAGAAAATCCAACTTATTAAGGGAACATCATTTTTTGGTTTGTCTACTTACTATACTTCCAAATTTACCTTTATTTAATATTAATTACAATAATAAATTTTCTTCGTTAGAATAATTACTCTAATTCCAAAGCAATGGTAATATAGGAAAAACCGCAAAAGAGCAAAATGACTTAATTAATATGTGTTCAAATATGGAAAGTGGCGAGTATTTTAGGACAGCATAATTTGGGACGGAGTGAGTATAAGTCAACTTCCATAGTTAAGGATAAAATTGTTCACAGTTAACTATTAAGGACACGGGGACTTATTTTTGGGGTTCAAAGTCTGATGACAAGATATGCTGGAGAGCTACCTTTTGAATGCAAGTGTCCAGAAAAGCTGGCTATTAAATAGCATGCAACAGTAGTGGAGAGTCTGACATCTGCGCATGGCACCTCGTTGCATTTCAAGTAGTTCGGCACCTCGTTGCATTTCAAGTAGTTCATCATTTTACATAATACCCTACATGAAGAGGAACTAATTGGGAAGATTAGTTAGAAAGTACAGTTTCGGAAGAGGACCGCTGGAAGGGGAGGCGTTTATGAGGAATTCCATCTTCAGCTCTCTTTTCTTCAAACCATTGCACGATTCTTTTCCGTGGAAGGTTCGTCACATGCACTATGCTGCTGACCATTGCATTAGTTGGTC | |||||||||
gi|74545150|gb|DT749233.1|DT749233 EST1183082 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1WJ32, ATTTGGGACGGAGGGAGTATG EST sequence (targeted fragment marked with yellow): ATCAATCTTCCCTCCTTCCCAAATCCCAATACTCTCTCTCTCTCTCTCTCTTCATCTCCACCGACAAACCACCACGCTCGCCGACGGAAGTGCAGCGGTGCTACTGTTCGGAGCAAAATCCCGCCAAACTTGAGATAATAATCAACCGCGCTCTTTTTACTCGAAGACTCTCTTCGATAATCAGGTATTTAAATAATTGTATTGAATGTGATACTGATCTACTGGATCTGGAGCAACCATGTCTCAAAATGTAGAAGCATCGGTGGGAGAAGAACCTGATTTTACATGGGGAATAAAGAGAGGAATGGGTGGCAAGAAGAAAGAGGTCCAGTTTTACGAGTCTTTTACATATGACGGCATAGAATACTTTTTATATGACAATGTGTATCTTTACAACGAGGGCGAGCCAGAGCCATATATTGGCAAACTTGTGAAAATATGGGAGCAACCACAACAAAAAAGGAAAGTTAAGGTTCTTTGGTTCTTTCGCCCGGCTGAACTTCTTAATTGGCTTGGAGATGTTTCAACTCTTGAAAATGAACTATTTTTGGCTACCGGTGATGGTCGCGGTCTTGCAAATATCAATCCACTGGAATCGGTTGCTGGTAAATGTCATGTTGCATGCACATCAAAAGATAGCCGGAATCCTCAACTTTCTCCGAAAGAAGTGGAAGTGGCTGACTACATATTCTATCGTACATTTAATGTAGAAAACTTTACCATATCAGACAAGATAGCTGACAAAATAGCTGGGGTTGAAGT | |||||||||
gi|71716743|gb|DR947380.1|DR947380 EST1138919 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1R492, ATTTGGGACGGAGGGAGTATG EST sequence (targeted fragment marked with yellow): GTTGAAATACGCAGAAGAGAGAGTGAGAGACAGAGAGAGGGAGAGAGAACGCTGAACCAACGCTCGCTTTGTGGATGTGAAAGCGGGATTTATTCGTATTTCATAAAACCCTAGTTACAAACTTACAACTGTTTGTTTGGAAACTCTTTCTATCAATCTTCCCTCCTTCCCAAATCCCAATACTCTCTCTCTCTCTTTCTCTCTCTTCATCTCCACCGACAAACCACCACGCTCGCCGACGGAAGTGCAGCGGTGCTACCGTTCGGAGCAAAATCCCGCCAAACTTGAGATAATAATCAACCGCGCTCTTTTTACTCTCTCTTCGATAATCAGGTATTTAAATAATTGTATTGAATGTGATACTGATCTACTGGATCTGGAGCAACCATGTCTCAAAATGTAGAAGCATCGGTGGGAGAAGAACCTGATTTTACATGGGGAATAAAGAGAGGAATGGGTGGCAAGAAGAAAGAGGTCCAGTTTTACGAGTCTTTTACATATGACGGCATAGAATACTTTTTATATGACAATGTGTATCTTTACAACGAGGGCGAGCCAGAGCCATATATTGGCAAACTTGTGAAAATATGGGAGCAACCACAACAAAAAAGGAAAGTTAAGGTTCTTTGGTTCTTTCGCCCGGCTGAACTTCTTAATTGGCTTGGAGATGTTTCAACTCTTGAAAATGAACTATTTTTGGCTACCGGTGATGGTCGCGGTCTTGCAAATATCAATCCACTGGAATCGGTTGCTGGTAAATGTCATGTTGCATGCACATCAAAAGATAGCCGG | |||||||||