| mature miRNA: CACGTGGTGCTTGGATTGCAGC species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|52376906|gb|CV226958.1|CV226958 WS0165.B21_M10 PT-DX-A-7 Populus trichocarpa cDNA clone WS0165_M10 3', mRNA sequence CACGTGGTGCTTGGATTGCAGC EST sequence (targeted fragment marked with yellow): GCCCACCTCATCCAAAAACCACTAAAATGGTGCCACAATTTCTGTTCTCAGCTTCTTTTATTCTATTCTTCCTTCTTCATTGCCCTCCAACCCTAGCTCAGTCACCAGCTGCAGCCCCAGCACCACCTGGTCCAACCAACGTCACCAAAGTCCTAGAAAAAGGTGGTCAGTTCAGCGTTTTTATCAGGCTTTTGAAAGCCACTCAAGAGGATGTCACATTGAATGGTCAGCTCAACAACACAAACAATGCTATAACCATCTTTGCACCTAGCGATAACGCATTTTCAAGTCTCAAATCAGGCACCCTCAACTCCCTAAGCGATCAAGAAAAGGCTGAGCTAGTACAGTTTCAC | |||||||||