| mature miRNA: CAGAATTGCAGTGCCTTGATC species: Populus tremula x Populus tremuloides database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|23968207|gb|BU812850.1|BU812850 N002B07 Populus bark cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA se CAGAATTGCAGTGCCTTGATC EST sequence (targeted fragment marked with yellow): GCCGGGCCCCATAACCCACGAGATAGGAGTTAAATAACAGCACTACATCCATTTCCTTTGTTTTTCTGAAAGAATATTTCTAGGCATGTGTTAATACAAAGAACAGTCTGTTCCACAATTGATTGCTCATTAATGGATCTATTATAAAACGAGCCTTCTTACAGATTGTAGACTTCATAACCAGGATTGCAGTTTCAAACTCTCTTATTAAGAATGTAAGATGATGGTAAGCCGGGAGGCTCTCGTGAACGAAGGAGGCCCTAATCATGGCACTGCAATTCTAAATATCTGTTGGCATGTTGCGATGCCAGACGTTTGAAATTGACATATCATTTGTTAATCAGAATTGCAGTGCCTTGATCAGGGCTTTGTTTGTTCCTGTAACCGCCAGGCTAGGGGAGGGAAATGCTGCTGTAAATGTGACCGCTGCTATTGTTAGGAATGAAAGAGGTGCTGGAATCTTCGAGAGAGATCATCAAGTTGGCTAGGAAATCATCAGACATGCTATTTTGTTGGAATCATTCAGCAGATATTAGGAACTTTGATGTTATTTGCTTTTTCTTCATGGATGATCTTATCATCCGATTGTGATCCCGATTTTCTTGTAATGGTATATTTACTGCCTATTTAATAGAAACTTATTTCAA | |||||||||
gi|24010445|gb|BU831765.1|BU831765 T025E06 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, CAGAATTGCAGTGCCTTGATC EST sequence (targeted fragment marked with yellow): AGCCTTACCATGAAAAAATCCCCAAAACCCTAATCCCCAAAACCTTCCTTCTTCTTCTGCTTCTTCTTCGTCTAATAAAAACCCCACCGAAATTAAACCCGGCAACGGCAATTACTCGGGTCAAAAGGTCCATTTCTCGAACCCACCCGAGACAACAAATCCGGACCCTGCAACACTGAGGGAACAATGGAGGTTTGCTATTAGGCAGTACAGTAAATGGTATTCTCACGCTTGGGGCACTGCTATTCTGGCTGGTGTTTCGTTTTTCGCGCTTGGCTGGATCATCAAGGGATCCAATCCTTTACCGTCTTCCAGGACTGATCGATTCCTTTTCTTCGCCTTCTAATGATGCTA | |||||||||