| mature miRNA: GAGCCGAACCAATATCACTC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|88421780|gb|CI621424.1|CI621424 CI621424 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GACCGGTTTTGATTTGATCTGTGTGATTTGAGTGAGTGAGTGAAATTCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGCGGCCACTCCTGGCCCCGCCCGGCCCCGTGATCAAGTGCCAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTTAAGATTCTCTTCACCTCGCTCTGCCACACCGACGTTTAATTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTTGGATTTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGTGTTCACTGGGGAGTGCAAGGAGTGTGCCCACTGC | |||||||||
gi|88348513|gb|CI630002.1|CI630002 CI630002 Oryza sativa (japonica cultivar-group) callus 50ppm CdCl2 Oryza sativa Japonica Grou GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GGTTTTGATTTGATCTGTGTGATTTGAGTGAGTGAGTGAGATTCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGCGGGGCGAAGCCTCCGGTGACAATCCCCGATCCGATCGCCGCGCTCCTCTCCTCTACCCCCATCCCCTCCTCCTCCGACGCCTCCGCCCGCCCGCCGCCGTNACCGTACCAACCGGAAAGCGCAGCTGATCCGATGGATCTCAAGGATAGCCTCTCCAAATTTAAGCAGCAGCAAGAGAGGTGCCAATCATCTTTGGCCAGCATAGCTGCATCGANCTCAAAACCAAAGCACAGGGCCCAACCGGTTAATGCTCCATCCGCTCCAGCAAGGCCACTACAACCTATTAAGTTTTCAAATGATACAGAAAGGCTAC | |||||||||
gi|88731757|gb|CI753477.1|CI753477 CI753477 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): TTTTTTCTTGGCCGCTTTCCGTGTAATGCCGGTGCCATTTCCGCCTCTTTGGTTTTCCCCGATCTGTGGTTTCGGTCTTGCCCGGTAGAGATTCGGGAACGGGAAGCGCGGCGGCGGTTGCGTGACGGTTTCTTGAGGGTTCTTGAGAGGTCTTGGTTCGGCTTGAGCAGCGTTTCTTGCTCGGCGGCGGCGGCGGCGGCGGCGGTTGCTAGATCTCCGGCGTGACACCGGTCGGAATGGGCTGGATGTCGACGGGGACGACGTTCGGGCGTTGATGGCAGGTGTGGTGTTCCNCATGATTGATGATGTGGAGATACTGGGATGGTCAGATGAAGAAAATGCTGTGAGTGTCTGTGAAAACTTATACTGATAT | |||||||||
gi|88392550|gb|CI625372.1|CI625372 CI625372 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GACCGGTTTTTGATTTGATCTGTGTGATTTGAGTGAGTGAGTGACATTCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGAGGAGAGTAATGGCGAACGCAGGGAAGGTGATAAAGTGCAACGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGCTGTTACTGGGGAGTGAAAGGAGTGTGCCC | |||||||||
gi|88372672|gb|CI612600.1|CI612600 CI612600 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GACCGGTTTTGATTTGATCTTGTGTGATTTGAGTGAGTGAGTGAGATTCTTTTGGAGGAGGGATTTTGGTTTGGTTTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGAGGAGAGTAATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGTGTTCACTGGGGAGTGCAAGGAGTGTGCCACTGCAAGT | |||||||||
gi|88316409|gb|CI621648.1|CI621648 CI621648 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GTGGGCGTGAGCAGAGAGCTGCCTCCAGCCCAGTGAGAGTAGGATTGGTTCGGTTCGCTCACTCGGTCAGCTTGAACACAAACTGCACTTCGGCTCATTCTCTCCACTGTTCTTCTTCCTCGGGGAGGGGGGAAGGAGGAGGCGAGAGCTCGAGGCGGCTAGGAGGAGGAGATGGAGGGAGATTCGGCGAGGAGGCTCGCATTGCTGGGGCTGTGCCTGGGCCTGCTTCTGCTGGCGCCCTCCCATCTGGCCTCGGCCGCTGCGGTGGAGGATGGCTTGCTCAGCAATGGTGACTTTGAGACAGCACCAGCTGGTGGTTTTGTCAAATCTGCTTAGTTGCTGAAGGTGCATCATCGATCCCTGGCTGGACGATCAATGGGACAGTCGAGCTCATCTCAGCAGG | |||||||||
gi|218497190|gb|FG962171.1|FG962171 MA_LYP9_00955 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): ATTTGAGTGAGTGAGTGAGATTCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGAGGAGAGTAATGGCGACCGCAGGGAAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGTGTTCACTGGGGAGTGCAAGGAGTGTGCCCACTGCAAGTCAGCAGAGAGCAACATGTGTGATCTGCTCAGGATC | |||||||||
gi|88351734|gb|CI617459.1|CI617459 CI617459 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GACCGGTTTTGATTTGATCTGTGTGATTTGAGTGGGTGAGTGAGATTCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGAGGAGAGTAATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGTGTTCACTGGGGAGTGCAAGGAGTGTGCCCAC | |||||||||
gi|117229860|gb|CT846315.1|CT846315 CT846315 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): CTCCGTCGAGCCACCTTCCTCAACCTCCGCGCCGCGCACGCAACTAGCCCACCAGCCGCGTCGTTTCCCCACCCTCCTCGCTCCGCCCCACCTCCTAGGCTGCTCGCCTCCTCGGCGTATCACAAAAAACTGAAACCGCCGGCACCCACCAACAAGCGGTCTTGATGGCTGACATTAAAAACCGAGCAGATTTCATGGATGTCGAGCTCCTCACCATGAAACGTCGTTCGATTTGGTGGGTTAGTCCTCCCCTGAAATCTTCAACCTCAGACTTCACCTTGAACACACCCAAGGGGGTGTATATTAACCTCCCGAAGAATTAAGAAAGGAGGGATTGGTTTTGTTTCGGCTCTACTTCAAGTTTCTACCGTCAGCGTTAAACAGGATTGAAATTTATTTAGTACATACACTTCACTAAAGGAGACAATTCATGGTATGAGGATCACTGGTATGTATACTAATTTTACATCACGCTGCATACCTGCACCGATAGTTCATTTTAATTCTGAATTCCGGATGCAAATTGCTTACTATCGTTGTAACAGCTGCTGGAGCAATCTATATATACATTGGGTAATCATAATTGCCTCATATTCATTCTTGGTCACATGATTTCTATATATTATTATATGCCCATCCTGCGACACATGCTGTGCAAGAGGTACAAGTAATTCCTTCCATAACAACAGTCTAGCTATTTTTATACACATTGATCCCTAATTTTTTATATGTCTATCCAGATTCTTATTTGGTATATGATGATCCTACTTTACACCCATATAACTTAATTTTTCATTTCTTTTCTGGCTAGAGTATAAAGAATGCTCTTTGTAATAGCAAAATTGAATAGTTTGTCAAATATTGGGTTTTTCATCAAGGCCATCCGACTATTTATCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAGGCCAGCTTGGCCTCAAGGGGGGGCCCGGTAC | |||||||||
gi|33694030|gb|CF322269.1|CF322269 HD--13-M24.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA library (HD) Oryza sativa J GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GCCCTTGGACACTGCCATGGACTGAAGGAGTAGAAACTCACCGGTTTTGATTTGATCTGTGTGATCTGAGTGAGTGAGTGAGATTCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGAGGAGAGTAATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCTTTGTAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGTGTTCACTGGGGAGTGCAAGGAGTGTGCCCACTGCAAGTC | |||||||||
gi|55408703|gb|CV721079.1|CV721079 YBH--02-M23.b1 Rice before heading yeast two hybrid lambda phage cDNA library (YBH) Oryza sat GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GGCACGAGGGAGGAGGAGGAGCTATATATAGACGGGGATGGTTCATCTAGCCTCCTCACCGGTTTTGATTTGATCTGTGTGATTTGAGTGAGTGAGTGAGATTCTTTTGAGGAGGGATTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGAGGAGAGTAATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGTGT | |||||||||
gi|218490849|gb|FG951083.1|FG951083 MA_93-11_07978 Mature embryo cDNA Library of 93-11 Oryza sativa Indica Group cDNA 5', mRNA s GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): ACTAGTGGATCCCCCGGGCTGCAGGAATCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGAGGAGAGTAATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAAGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGTGTTCACTGGGGAGTGCAAGGAGTGTGCCCACTGCAAGTCAGCAGAGAGCAACATGTGTGATCTGCTCAGGATCAACACTGACAGGGGTGTGATGATTGGTGATGGCAAATCACG | |||||||||
gi|117210053|gb|CT851175.1|CT851175 CT851175 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GCACCTGGCTTACACTGATCGATGCTGTTCTCAGTTCTCACCACCATTTTTACCTCGAAGATTTCTAGATTCGATCAGCAAACCAATTGGAAGCACAATGCAGTTCAGGCTGGTGATCTTGGTTCTGCTCCTCTCCTGCTCGCTTCAGCTGCTTCGCGCGTTTCCATTCCCCATCCCGTTCTTTGGCCCCTTCACGAGCCCACAAGACGTTGATGCGATAAACGAGCTGTACGCGTCGCTGGGCTCGCCTGACCTCCATGGCTGGGCTTCTTCAGGAGGAGACCCCTGCATGGAAGCATGGCAGGGGGTGCAATGCCTTGGACCCAACATCACTGCAATAGAGCTCAGAGGTGCAGGCCTGGGAGGAAAGCTGAGTGAGACGCTGGGGAAGTTCACTGCCATGACAGCATTGGATCTGAGCAGCAACCGCATTGGGGGAGTGATTCCTGAGAGCTTACCACCTGCAGTAAAACAACTGAATTTATCTTCGGATAGTCTCAGTGGCAAACTCCCAGATTCGATGGCGAAGCTGAACTCGCTTTCGACACTGCATGTTCAGAACAATCAGCTCACTGGCACACTTGATGTTCTAGGAGATCTTCCCCTGAAAGACTTGGATATAGAGAACAATCTTTTCT | |||||||||
gi|66924948|gb|CX111796.1|CX111796 EI065H15 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GAATTACCGGGCCGACCCACGCGTCCGCTGACGCGTAGGCAGACGCGTAGATCTGATTTTGAGTCATTCGAGTGAGCGAGTGACATTGGTTGGATGAGGGATTTTGGTTCGGATTGGTTTGGCGGGTTGTGCAGGATTTTGTGGGGAGGAGAATTATGGCAACCTCATGGAAGGAGATCAAGTGCAAA | |||||||||
gi|88363684|gb|CI609041.1|CI609041 CI609041 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GACTGGTTTTGATTTGATCTGTGTGATTTGAGTGACTGAGTGAGATTCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGAGGAGAGTAATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAACCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCCTGGTGACCATGTTCTCCCTGTGTTCACCTGGGGAGTGCAAGGACTGTGCCCACTGCAAGTCACCACACAGCAACATGTGTGATCTGCTCAGGATCACACTGACACGGC | |||||||||
gi|88351998|gb|CI625998.1|CI625998 CI625998 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GTTGGTTTTGATTTGATCTGTGTGATTTGAGTGACTGAGTGACATTCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGAGGAGAGTAATGGCGAACGCAGGGAATGTGATCAATTGCAAAGCGGCGGTGGCATGGGACGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTTAAGATCCTCTTCACCTCGCTCTGCCAAACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAACCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGCTGACCATGTCCTCCCTGTGTTCAC | |||||||||
gi|218503145|gb|FG962961.1|FG962961 MA_LYP9_01745 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): CGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGATTTGAGTGAGTGAGTGAGATTCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGAGGAGAGTAATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGTGTTCACTGGGGAGTGCAAGGAGTGTGCCCACTGCAAGTCAGCAGAGAGCAACATGTGTGATCTGCTCAGGATCAACACTGACAGGGGTGTGATGATTGGTGATGGCAAATCACGCTTTT | |||||||||
gi|40493173|gb|BX900635.1|BX900635 BX900635 Oryza sativa library (Han B) Oryza sativa cDNA clone y736f10p5, mRNA sequence GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): AAAAAAAAAGAGAAAAAAACTCCCGAATCCCCATCCTCCTCCGCGCCGCCTCGCCGGAATTCGCTCGAGGTCCGGCTAATCGAAGTTTTCGTGATCGGTGATTTTGGTTCGGTTTGCAGCGGCGGTTGATTTCTAGGGTCGGATCGCGGGGGGCGTTCGGGAGAATGGACGCAGTTCGCAGCTGGCAGGATAACCCTAGAAGTTACNNTCCTCCAGAGCATCNCGGNGCAGCTCATCGACGGCACCAGGGGGGGACGACACAACCCCTTCGGNCNNGCGGCCAACCACGAACGAAGCTNCCATCGCTAGNCACTCCTCCANNCAACAACCCAGGACGAACTCCGC | |||||||||
gi|86904393|gb|CI308603.1|CI308603 CI308603 Oryza sativa (japonica cultivar-group) BAP treated callus Oryza sativa Japonica Grou GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): ACCGGTTTTGATTTCTCTGTGTGATTTGAGTGAGTGAGTGAGATTCTTTGGAGGAGGGATTTTGGTTTGGCTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGAGGAGAGTAATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCT | |||||||||
gi|117219820|gb|CT852275.1|CT852275 CT852275 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): ACTTGGGCATTGGCAAAGAAGGCAATTTCAGGTCTACACGATAAAAGATCAGGCTAGCTAGCAAATCAAGTAGCTGAAGTATCTAGCTAGAGGGCTAGAACTTGAAGATGGAGAAAGAAGAAGAGGACATGGTTTGGTATTGTTTCGGCTCATGTCGTTCACACAGATGTGAGCCGAACCAATATCACTCATGTATTCTTCATTCAGAGAATTTCTGTCTGAATTCAAGCATGTTAGCTTTGAGTGATTCATTGTATGCGCTGGTAAGTGCTATAAGCTTTTTTGGTAAGTTTTAGATCTGGTGTTCAATGATTCTTTGAGGAGAAAGCACTTTTAAATAGAGATTATTTGAAGGAAAAGGTATGCATGTCTACAGTTTGAGCATAAGAGAAGCTAATCTCGCAAAAGAAGAGAAACCAATCTTTCTGATTTCTGAGGATTATTGATCCACTTGTCATATACTCTTGTTCTACTCTGAGATTTCATGGAGGTTGAAGAGGTTCATATATATATGGAAAATATATGTGACTTCTTTATGATAAGTTTATGACAGATAACCAAGAATGCTTATGAATTAAAGGTGGTTTAGCATTTCTATCAGCAGCGCAGCAGTAATTTTCTCTACAGTATATGTAATGATTTGGAGTTTTGGATGTCAGAGATTGTGTAACTCCGGTAGTTTTTGAGGTTTGGGGCTATGAAGACAAACCCCGGCTTGAATGTTCATATGTTCATTTCAAGCACTGCTTATTTGTTCAATAAAATACAGAGTAGGTCTTAAATAAACAGCAGCTTGAACTTGAACGCATTCTTTTCTCAATAAGAAAGTGGAAACTCCCCGGCCATTTCTTGGAGGCCATATCTACCCTTTTTAAATTTTGATCTAAAGGTTTTTTACGGGTATTTTCTACCAAGGAATTCCAAAATTTGGGTCCCGGGGGAACCCTTTT | |||||||||
gi|3107519|gb|D43259.1|D43259 D43259 Rice callus cDNA (H.Uchimiya) Oryza sativa cDNA clone SS134, mRNA sequence GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GATTTGAGTGAGTGAGTNAGATTCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTTNTGGGGAGGAGAGTAATGGCGACCGCAGGAAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAANCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTTCCCGTNTTCCCCTCGGATCTTTCGGCCATGAAGCTGGAGGTATTGTGGAAGAGTNTTTGGAGAGGGTTTGACTGATCTTTGCCCCT | |||||||||
gi|55415585|gb|CV727961.1|CV727961 14Salt--06-G08.b1 Salt treated rice leaf lambda phage cDNA library (14Salt) Oryza sativa Japo GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): AACCGGTTTTGATTTGATCTGTGTGATTTGAGTGAGTGAGTGAGATTCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGAGGAGAGTAATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTG | |||||||||
gi|88391334|gb|CI598152.1|CI598152 CI598152 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GACCGGTTTTGATTTGATCTGTGTGATTTGAGTGAGTGAGTGAGATTATTTGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTTGTGGGGAGGAGAGTAATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCT | |||||||||
gi|56148099|gb|AU181903.2|AU181903 AU181903 Rice callus (2001) Oryza sativa Japonica Group cDNA clone C61646, mRNA sequence GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): TTGATCTGTGTGATTTGAGTGAGTGAGTGAGATTCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGTGGTTTGTGCCGGGATTTTGTGGGGAGGAGAGTAATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGTGTTCACTGGGGAGTGCAAGGAGTGTGCCCACTGCAAGTCA | |||||||||
gi|88363799|gb|CI610559.1|CI610559 CI610559 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): AACGGTTTTGATTTGATCTGGGTGATTTGAGTGAGTGAGTGAGATTCTTTGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGTGGTTTGGGCGGGATTTTGTGGGGAGGAGAGTAATGGCGACCGGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAAGCCGCTGGGTGATGGACGAGGTGGAGGTGGCGCCGCCGAAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACTTCGCTCTGGCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCTTGTGTTCACTGGGGAGTGCAAGGAG | |||||||||
gi|88345192|gb|CI628446.1|CI628446 CI628446 Oryza sativa (japonica cultivar-group) callus 2ppm ABA(abcisic acid) Oryza sativa Ja GAGCCGAACCAATATCACTC EST sequence (targeted fragment marked with yellow): GGTTTTGATTTGATCTGTGTGATTTGAGTGAGTGAGTGAGATTCTTCGGAGGAGGGATTTTGGTTTGGTTTGGTTTGGTGGTTTGTGCGGGATTTCGTGGGGAGGAGAGTAATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCC | |||||||||