mature miRNA: GCATCATCATCATCATCATAA species: Gerbera hybrid cultivar database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|58325148|gb|AJ758220.1|AJ758220 AJ758220 G00004 Gerbera hybrid cultivar cDNA clone G0000400002H01F1, mRNA sequence GCATCATCATCATCATCATAA EST sequence (targeted fragment marked with yellow): GATCTGGGTATGGTCGCAGGCCGGAGCCTACGCCGGAGTATGGATCCGGGTACGGAAGGAAGACTGGCTATGGAGAGGAGCCGAGTGAGGAAAGGTACGGTGGTGTTGAGGAAGATAACCCTAAACCTAGCTACGGGAGGGGCGATGAAGATTATGGTGGTCGTAAGAAATATGGAGACAATGATTTTGACGATGATGATGATGACAGGAAGAAACACAGGCATCATCACCGCAAGCACTATGATGATTAAGAAGAAGCTTCGTTCGTCGTTGTTACTATAAAAGAATACATAAATAGGCGGCATTTTATTACTTGTGATCTTGTTGTGTATTGCCATCTTCACAAACAA | |||||||||
gi|58326423|gb|AJ759495.1|AJ759495 AJ759495 G00004 Gerbera hybrid cultivar cDNA clone G0000400020A12F1, mRNA sequence GCATCATCATCATCATCATAA EST sequence (targeted fragment marked with yellow): GGGATCTCAGAAGCCAAAAATGAATGCATTTGCGTTCAAGTACCCTGAGGCTAGTCCACTTGTAGACGAAGGTGTTGATGAACATAACAAGTTGGATGAATCAAACCCTATCGTTTTGCTTGATTCCAAAGAATCAAAGATTATTGCTTACATAGACGAAACCCCAGTTACAGATTCTGAACCCGTCAAATACACTTACGATTATGGAGCAACTTTTGAGACAGATGATAGTTCACATCGAGGATTAGGGTTTCAAGATGAATCAGAAGCAAACCCTAGTTTCATTGAAGCAACTCCAATTACAGAAAACAAAGAATTTTCCCATTACGATTGTTCATCCTCAGAAGACATGGAAACTGATATAATTAACGATAATCCCTCATCATCTCCCGAGGAAAACGCAGGATTCTTATCAATCGGAGGCATGAAATTATACACCCATGATATATCTGATAATGAAGATGATGAAGATAACGAAGATAATGAAGAAAGCTTAGATTCATCAGAGTCTGAAGATTCGTGTAACTCATCTGATAGTGACGGATTATATAATAGCGATTCTGATATAAATGATGAAATTGCAAAAGATTATTTTGAAGGGATTGGTGGGAGTTATAAAGTTGCAAATGTTGATAAATTATTAGGGAAAATTACTGATAGCTCCGATGATGATGATGATGATGATGATGATGATGATGATGATGTTA | |||||||||
gi|58325123|gb|AJ758195.1|AJ758195 AJ758195 G00004 Gerbera hybrid cultivar cDNA clone G0000400002E07F1, mRNA sequence GCATCATCATCATCATC-ATAA EST sequence (targeted fragment marked with yellow): GAGGGAAGTTCAGGGAGATTTGTGTGGTTTTGTTGTGGATGATGATGATGATGATGTATTTAAACTTTTTGTGTTTCTGTTTTGCCATGTGCTTTTCTTGTCACAAGCTGCTGAAACTTTGGTTTTTTATGATTTGGTTGTCATGATTATCTGTTTATAGACATTTATTAAATTATTAGACTATAAATATGCAATAAAATATTTGTTGGCTCCAAAAAAAAAAAAAAAAAA | |||||||||
gi|58325123|gb|AJ758195.1|AJ758195 AJ758195 G00004 Gerbera hybrid cultivar cDNA clone G0000400002E07F1, mRNA sequence GCATCATCATCATCATCATAA EST sequence (targeted fragment marked with yellow): GAGGGAAGTTCAGGGAGATTTGTGTGGTTTTGTTGTGGATGATGATGATGATGATGTATTTAAACTTTTTGTGTTTCTGTTTTGCCATGTGCTTTTCTTGTCACAAGCTGCTGAAACTTTGGTTTTTTATGATTTGGTTGTCATGATTATCTGTTTATAGACATTTATTAAATTATTAGACTATAAATATGCAATAAAATATTTGTTGGCTCCAAAAAAAAAAAAAAAAAA | |||||||||
gi|62942938|gb|AJ761727.1|AJ761727 AJ761727 G00006 Gerbera hybrid cultivar cDNA clone G0000600003D05F1, mRNA sequence GCATCATCATCATCATCATAA EST sequence (targeted fragment marked with yellow): GCCAAAATCCAATCAAATCCAATCCTGAACCCTAAATCCCTAATGACAAAGATCTTCTGAAGTAGTAGTATAATTCTACAGAGATATGGTATTCAACGCCGTCTTAATTGCGTCGGTGGCCACCGTCTCCGCCGATGTATGGCAATCGGTAGCATGTGTTTCCGAACGAATCAGCAGCGACGAGTTGTTAGATCTGGTGATCTGTTTTCCTCTTCAACAATTAGGTCGATTTGCGCTTTGTGTTTGGAACTTTTTCTGTGTTCCTCCGTCTCCTTCTGATTCTTATTATTACTCTTACGCTTATTACGATGACGATGATGATGATGATTCCGATTCCGGTTCCGATTTGAGTTCCGCAGGTGTTGGTGAATTTTCCGGTTACGATCACGGCCGCCGCGTTTCGTACTCCGATTCGCATTCCGACTGATTTTTCATCGAACATATATCGGTAATTTGTTATCGTCGTCTCATTATGTACAGTAACCCTAATTAAGTTTACGAATTTTTTGATATTTT | |||||||||
gi|58321840|gb|AJ751186.1|AJ751186 AJ751186 G00001 Gerbera hybrid cultivar cDNA clone G0000100018C06F1, mRNA sequence GCATCATCATCATCATCATAA |