| mature miRNA: TACCAAAGAAGATTTGCCCCA species: Manihot esculenta database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|119009714|gb|DV447156.1|DV447156 CV01021A1H08.f1 CV01-normalized library Manihot esculenta cDNA clone CV01021A1H08.f1, mRNA s TACCAAAGAAGATTTGCCCCA EST sequence (targeted fragment marked with yellow): CAAATCTTATCGGGGCGACAGAGATTTCAGTTGNNNNNTTGGCAGAGTCATTAATGTTGGGAGTTGCAATAATTGCAAATGACATTTCACATTTTGGATTTTTAGCAATGCTGTCACTTTTATCAGTAGTTGGGGCAGCATGGATGTTTTGTCGATGGTTGTCGAATCCAACAGATGAACAAAGAAGTCTTTTCTCTATCAGCCTAGGTTATAATTTTTAGCTTTCCAATTCGAAGGAACACAGATCAAGGCTTTTAACTGTTACAGGAGCCAAGCTAAAGCCATTTCAGAATACATGTTCCAGAATCAGCATGTGTATAGCAGCCACAGAAGGCCTTGAGGTAAGTCTTCTTTGGCGACTTAGTGGGTCAGAGTTTCTGTAATTGCACGGCTCAGTTGAAATAGCATTGTCACTTGACTTTGTATCATATTGGACAGTGTCCATGTATAGTGGAGAGGAGAATGAAAGGAATTTCTTTCCCCCTAATGCTGTAAAAACAGTTGAAACAGGAAAAAAAAAATTGTAAAGGTTTTGATTTATTTAAAAAAAAAAAAAAAAAATCG | |||||||||
gi|164395169|gb|DB946138.1|DB946138 DB946138 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_023_M2 TACCAAAGAAGATTTGCCCCA EST sequence (targeted fragment marked with yellow): TCAAAATCATCTCATTAATTATTATTTCCTTTTTGAGCCTCGAAATTCAGAACTTTTATATTGTGTACGGAACTTCAACGGCCTTTGTAGCATGCAATAATTTGCCCTTCGTTGAAACCCATTAACATTTTTACTCAAATATTTCAGGATTATGCAATGGGATTGGGTTTAGCTTATCAATGTAATAAGATGCACACGTGTGATCAATATATATACACATGCATGAAAAAGAAATCATTCAACTAGAACTTACTAACACTATCATAGAATTCCAAGAGAAGCTGAAAATAAAGGCATTGCTTGAGAGAGAATTGTATGGACTGAATTGTGGGGCAAATCTTCTTTGGTAGTAGGCCTACTCTTTGTAGTTGATTACAACATGAGTTGCCAACTGCCAAAGCAAGAATTGCCCAGGAATGCATACCCATAAACATAAGGGTACGTACCCTTAAACTATGTACTGATGAAACAGTGCCCATAAACATAAGGGTGCGTACCCTTAAACTTTGTACTGATGAAACAGTTTCAAGGTTCAATAGTAATTTATAGTTCAGT | |||||||||