miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TACTCCCTCCGTCTCTAAATA
species: Cenchrus ciliaris
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|164154951|gb|EB668774.1|EB668774 75W_JR_E04 pAPO Cenchrus ciliaris cDNA 5', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||| ||||||| . ||||||
ATGATGGAGGCAAGAATTTAT

EST sequence (targeted fragment marked with yellow):
CTTAAATACATGACGTGTAGGACAAGCTATTTAGTTCATATTTGAACTAATTTGGTTGTCCTAAACGTCATATATTTAAGAACGGAGGTAGTATCTGCTAACTACGCTTTGGATGCCAATGGTTACAGAACAATGGTTTCTCACTAATGGGCGATATGTGGTTTTAAAAATCTTATGTGCTTAATGCTTCGTGAC



gi|164127956|gb|EB661172.1|EB661172 78W_JF_G01 pAPO Cenchrus ciliaris cDNA 3', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||||||||||||.| |||
ATGAGGGAGGCAGGGTCCTAT

EST sequence (targeted fragment marked with yellow):
GAAATCAAGTATCAAAATATGCAATTTTTTCTATTTAAAATAAATTATTTTGAGAGTTATTACTGGTCAAAGTTGAGAAAGTTTGACTTTGAAAAAGTCTAAATGAAGCTATATCCTGGGACGGAGGGAGTAGCTAGTTCAGGGAGCAAAAGGGGAAGTATTATGTATATGCTACGACTACCGCTTTCTTGCGAACTGTTAATGTCTATGCATTTCAGAAGAAGAAACCATGGCGAAAAGTACAAGTATATCATCAATTCTATGCGATGGAAATGGACATAACTGTTGGTGCAACTTTATAGTACAATTGTGTGTTTGTGTGTGCTTCGTGTCTCTCTCCGTCCTCGTCTCTACTTGGGCTTGATGGATCCTTGTTGGTTGGCCTCTTCCGTGACTTGGGTTCCTCCCCTTGAGCGCCGTTGGATGGTGGTAGGTGGTGGAGCTCAAATGTGCGGCGAAAGGTGTCACCACCAGCTAGAGGGGAGATCGCCATGTCTGGTGAAGCTTTGGTTTGAGTATCTTTCACCTCTCTTAGTCCCCATTCCGTTGAGCGGCTCTCGGATGGAGGGTGTCATCGGAGCGACGTAGCAACGAGGGGTGGTGTGGAGGTGCAATGGCCTTGGTTTAATCAGCGAGCATGTTTTTCGATGGATTCTCTTAAAAAGGGATCAGGAGTAGTCTTTCGGCTTGCGCCATAGATGATCCTTGATTTGTTTATTTGTCGACCTGTTGTAACATCCTGCTCATTTAAGGCATTTTAAAAACCCACAATTTATTAAAATTTTACTTTAATTAAAAAAAAAAAAAAAAAAAAAA



gi|164177639|gb|EB664239.1|EB664239 25Y_JR_B10 pAPO Cenchrus ciliaris cDNA 5', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||||||||||| | | ||||
ATGAGGGAGGCAAAAAGTTAT

EST sequence (targeted fragment marked with yellow):
GCGGTAAACACATGCCATTAAAGTGTTCAGATAAACTCCAGTCATAGCCCAAAATTTGCTTTTGTAAATGTTGTCAACCCAAATTTCATTGTGTTTTGATTACCAAATTGCAGCCTGTTTTAGTACATGTTATCCTTGTTGTCTGCTCTATTCCCTCCGTTTTAAATATATAATGTTTGCATCCAAACACCATATATTGAAAAACGGAGGGAGTATTTCTTTTCTACACAGTTATCTTTATATTTGGGTTATTATTTGAAACCGGGATTGAGAGATGGGGGGTTATTCTCCTTTTCTTTTCTCTTTTTGGGACTCTGGATTATCTGAAGGGCAATGATGGGAGGCTGGGGGGTTTCGGATGGGTACGAGGGATCAAAGAGGCCACGAATGATGATGGAATCGAATCCCTACTTCGCAGTGAACGCAGGGAGTCCATTGGATGTCTCAAAGAGGGCCAGGATGATGGATCCAGGTGCTCCCTATTTTGGGGCTATGGGCAGCAGCGCTGGTGGTGCCAGTGGTGGCTTCTACCAGCCCTTCAGCAGCAACATAGCTGGTGCAGGGGTTAGCACTGGCATCCAAAACTTTCCAGGTGTCCGGCTGCGAGGACTCCCTTTCGATTGCAACGAAGTTGACATCTGCAAGTTCTTTGCGGGGCTGGAAATAGTGGATTGCCTCCTGGTTAACAAGAATGGCCGCTTTACTGGTGAGGCATTTGTGGTCTTCCAGGGGGCCATGCAAGCAGAATTTGCTCTGCAT



gi|164139313|gb|EB657334.1|EB657334 81Z_JF_D01 pAPO Cenchrus ciliaris cDNA 3', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||||| ||||| . ||||||
ATGAGGAAGGCAAGAATTTAT

EST sequence (targeted fragment marked with yellow):
ACGAAAGTTGTTAACTCTCCCCCATTTCTAATGCCAAGTGCTAGAAACAGTTTGCTGCCAATAGGTTCATCTGCTGGGAATTTAGGGAACAAGGATCCTGCAAACAGGTCTGCTTATCTTCCTGCAAACTTTGTATTATCACCATTTCAGAGAAAGGACATTGTTATGCATGTGGAGGGTGTTACTGCCCTTCACCAACTTGTACATAAAGTAGTCCACAATAATGAAGAACCAGCATTTGAGGAGCTTGCTCAGGAGAGATTGTCGCTGGATCCCGCCCGAGAGAAGGCGGCGTCTCTGCAAGCAAAACAGAAGCCACCAAAAAGAGATGGCTCTGTTACAGCTGCGGCTGTAGGCGCATCCCTTGGTGCGGGACTGGGAATTGTGATGGCCGTAATAATGGGAGCAGCGTCGGCTCTCCGAAAGCCATGACTCTTCATGCCTTGTTTTGATTTATTTTTTGTTTATGCTACCTTCGTTCTTAAATATCTGATGTGTAGGACAAACTATTTAGTTCAAGATGAACTAATTTGCTTGTCATAAATGTCATATATTTAAGAACGGAAGGAGTAATTCTTTTTTTACCGCTTCTTCCAAAAGAGGTTACTCATGTTCCAGGCGTGGAGCAATCTCCTGGGGAAAAAGGCCCCCCTTAGGGGGAAAGTAGATCGGAATAGGTAGGGGATATTGCAGTGCCACATTTGGCGGTATATAGAATGAAATTTCTGTCTAAAAAAAAAAAAAAAAAA



gi|27532349|gb|BM084440.1|BM084440 pPAP_07_B12 Apomictic pistil cDNA library Cenchrus ciliaris cDNA 5', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||||||||||||.| ||| |
ATGAGGGAGGCAGGGTTTT-T

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTGGAGACAATGAAACTACAATAGAATGCACCACCGAGTCGAGATCCTCATACCCGCTAGAACAGACAGCAAGGACGAGTCTTTCATCTTATTTGCATGCGGGTATATTGTTCACCTCAAGCTAGCACCTACTCCCTCCGTCTCTCCGTCTCCCAGAAAGAGCGTCGTCCGGAAAGTGTGTCTGTGAGACAAACACGGTTTTCTAGCGATACTCTTTTTGGGACGGAGGGAGTAGCAGACAATAGAACGTCGAAGCGACTGTCAGCAGCGGGATACAGTGACACATGCTGTGAGCAGAGGCTTCGAAACCACAGAACTGCCTCCCGTCTCTCTAGATGGCTTCCTCACATTATAGGAGACTTTGAAGTCAGGCGCTCTTCAGAAACTGAGCATGGTGTGCAATGTGATCATCGACGAATGTAGCGATGAAAAAGTATGAATGGTCATATCCAGGCTGCATGCGCAAGATCAGAGGAACCCCAACAGCCTTGCACGCCTCCTCAAAGTTGCGCGGTAGCAGCTGCTCAGCCAGGAACTTGTCATCCTCCCCCTGGTCAATTAGGATAGGAGACGAAACTTTGTTGTTCTTTTTAACCAGGCAGGTAGCATCATATTCCTCCCAATCTGATTTAGTTGAGCCCAGGTAATTTGAGAATGCTTTCTGACCCCATGGNGCAGTTATCGGATTGGGCGATGGAGCAATGCTGATACTGACTGGTATTTATCAGTATTTTTCAAGTAAATTGTCAGTGCACCATGCCCTCCCATTGAGTGGCCCAAAATGGATGCCCTGGGTAGTGGTGGAACTGTTCAAAGTGATCGCTCAGAAACTTTGGGAATTTC



gi|164222022|gb|EB654073.1|EB654073 4W6III_JF_B08 pAPO Cenchrus ciliaris cDNA 3', mRNA sequence

TACTCCCTCCGTCTCTAAATA
||||||||||||| |||||
ATGAGGGAGGCAGTATTTTAT

EST sequence (targeted fragment marked with yellow):
TGACACTTATTTTATGACGGAGGGAGTACCAAAACTTTAGCTATTTAAAGTTTGAATAGTAAATATTTCTTCAAACCTAGTAGTAGATGCTAGAAACCAGAAAAACATTTTTCTCAAAAGAATCAGAATCGACTTCTCCCATTTGAAATGATGTCAATAAACTAAATCCTTGAAAAACAGGGACTTTAATCCAGTTTGGACACACACACTTATTCGAACTAGCTAGGACCCGTCGTAACAAATTTTGCCTTGCCACCTTTTCTTTCCCAA



gi|164199690|gb|EB665026.1|EB665026 77X_JR_B09 pAPO Cenchrus ciliaris cDNA 5', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||| ||||||||. | ||||
ATGATGGAGGCAGGAACTTAT

EST sequence (targeted fragment marked with yellow):
GTTTACAGAAGAATGGCTTGCTGTAATGGAGGCTCGTGGGCAGGAAGTTTTGGGACAAAAGACTGGCGCTGTACAAAATTCTCCCCCCGACAAGATTGCTCCAGAACCCAGTCTGTGGTCACCGGTTAAACGGAAAGCGCAGGATGTTGGACCATTTGACTGTACAAAGTACTCGAAAACATCTGATACTTCTTAGCTTTAAACCATGGCCATGATGTGGTACAGAAATCGGTCAGAAGATGCTCAAAGTGACTGATTCTCATTTTTTTTTGCCCATGAACCATGGCCTTTTGATCATTGTATAAAATAGATACTCCCTCCGTTCTTAAATATATGACGTTTAGGACAAGTAAATTAGTTCATATTTGAACTAGCTAGCTTAAACGACATATATTCAAGGACGGAGGTAGTAGATGTTTGAGACCACACTGCACGGTGCACGCCACGCAATGTATGTACGCATCACTTGTTGCATTTGCATTGGACAGGGCCACAACCACGAATAGTTAAGTAGCGGAAGTTTCTTGTTGCATTGGTGACCACGGTTCTTCCAATCCTCGAAATAAGAGTAGCCGCTCTTGGCCTTGGTTATCATCGATCTGAGGGCTTGCACAACGGATGTTGTCATCCCTCCCGAACTTTCAGATTGGTCAATTTGGTCCCTCAACTTTTAACTTTTGGTCAAATTCATCAAAATGCTGATGTGTTACTCTTTATTGTCAGTGAACTAATGTGAAAAGTCCTTTATAAAAAAAAAAAAAAAA



gi|163976705|gb|EB672521.1|EB672521 72X_JR_H02 pAPO Cenchrus ciliaris cDNA 5', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||||||||||| ||| ||||
ATGAGGGAGGCA-AGAATTAT

EST sequence (targeted fragment marked with yellow):
AGGACTTCCGCCGCTTGTTCAGGATCTACATCTTCCCGAGCAAGTTCTTGGTTGATCTCTTCCTCTTCGACCACCTCCCGAAGGGTATGCAGCGCGCCTCTTCCCCTTTCCCCTTGCTTTGAACAAAATCTGTTGGTTGTTGTTTGTGCCCTTGTGATTTCGTCCCGGTTTAGCTTTTTGGGTTCGTTTGGTAGCAAGATCTTGGTTGTTTTCGTACAACCCGTTTGGGATTTAGGGTGGAGACTGGAATTCACTCTTATTCTTCGAGGTAGGATCTCGGTTCTTTTTGGTTGTGAGATGACATGGTGCTAGGTGATAATTTCTTTTTCTATTCGATATGTTTGCTTGTCTAAACGTCATATATTAAGAACGGAGGGAGTATTGATCTGCTTTTTTTACCAAGGTTCTACCGCCCTTTGTTAATATGCCCTGTTAATGAACAAATGTCCACTACCTAGATTTCCCCTTCTTAGGGGGAGTTTGTAATCATTGAATTTTGATGGATCATGTTTAGATATACTATATTAGTATGCTGGCTGTTCTCTTGCTGTCAAGTAGTTATAACAAGATTGGGTGCAGTTTTTAGCCCGGATTCTGTCAGTCAGCTTGTTCTGGACTCTGGCTTAGTGGTTTGAGGATGTAATTTTATACGTGTACAAAGAATTTAAGCTTGATGGAAATAATTTAGATTACATCATGAGATGAAACTATGTCATCTCATGCCTCTTGGTTACCAAAGAGTTTCTTTTAGGTTTGTTTGCTTCTTAGTGAATATAAATGGAACTGAAAGGGAACTGAA



gi|164073173|gb|EB653420.1|EB653420 81Z_JF_A04 pAPO Cenchrus ciliaris cDNA 3', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||||| ||||| . ||||||
ATGAGGAAGGCAAGAATTTAT

EST sequence (targeted fragment marked with yellow):
TAGGACCAGAAACCTTGTCAAGATTGATGTAAATTTGACACTGACAGCTACTCAAATAGTTATTTTTCCACTCAAGCTGATGTAGAACCTGGATATAATTGAAGTCCTTTCTTGCCAACTCAAGATATACATTGTTATTCACAAGAGGCATCCTGACAAAAGTGGCCATCACACATAGAGCCTCATGAGACCATTTTGTCAGTGTGACGACACATGCAAGGGTGTTTAAAAAAAGGTCATACGTAGAGAACAAGTCTGAATCGCCCCAGGAGCCATCAGGGAGCTGATTGTTGAGGATCCATTGTATGGCAGCCGGAAACTGGGGGCCCTCTCCGCCATCCAGCCTTGGTACCATAGCAACCCAAGCGGTGTCGTATGCTGAGATGCTGATGTCTCCCTCTTTCATGGATGAGAGATTCGTCCTAATCTCATCAATGAGTGCTTCAAAGTCTGCCCCGTTAGCNTGATGGAAATTGTCAGCAACAATTGGCAAGTTTTTTCAAAAAGGGTGTAAACGTCATATATTTAAGAACGGAAGGAGTAGTCAATATGCATTTCAAAAGGGGGAATGGCAAATGCGAAACGATCATCTCGAAACAAAAATGAACCACAGAAGAAGATTTACTTGGTAGTTGTCAAAAAAAAAAAAAAAAAA



gi|164125939|gb|EB661137.1|EB661137 77W_JF_G04 pAPO Cenchrus ciliaris cDNA 3', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||| ||||||||. | ||||
ATGATGGAGGCAGGAACTTAT

EST sequence (targeted fragment marked with yellow):
ACAAATAATGCACCAACTGTTAAGGAACCTCTGTTGTTACATGTGGGGTGTGAGCATAACCACAATTATATGAGCACCGAGCCTTCTCCTATGAAACTGGAAGCACCTACGACTGGTGTGGAAAGTCAACATGCTTTATCAGTAGAACCAAACATGGAATACAAAATGGTGCTTGACACAGACAAGTTGTCAGCTCTAGAGGGTGCATCACAAATAGAAAACGTTAAGGCACTGGACCGATCGCGGACAAATACAATCCTTAAAGATCATCTGAAGAACTTGGTACCGTTTACAGAAGAATGGCTTGCTGTAATGGAGGCTCGTGGGCAGGAAGTTTTGGGACAAAAGACTGGCGCTGTACAAAATTCTCCCCCCGACAAGATTGCTCCAGAAAACAGTCCGTTTTTTCCGGCTAAACGGAAAGCGCAGGATGTTGGACCATTTGACTGTACAAAGTACTCGAAAACATTTGATACTTCTTAGCTTTAAACCATGGCCATGATGTGGTACAGAAATCGGTCAGAAGATGCTCAAAGTGACTGATTCTCTTTTTTTTTTTTTTTTTTCATGAAAAAAAAAAAATTGATCATTGTATAAAATAGATACTCCCTCCGTTCTTAAATATATGACGTTTTGGACAAGTAAATTAGTTCATATTTGATCTATTTAGATTAAACGACATATATTCAAGGACGGAGGTAGTAGATGTTTGAGACCACACTGCTCGGTGCACGCCATGCCATGTATGTACACATCACTTGTTGCATTTGCATTGGACAGGGCCACAACCACGAATAGTTAAGTAAAAAAAAAAAAAAAAAA



gi|164060014|gb|EB669093.1|EB669093 82Z_JR_E10 pAPO Cenchrus ciliaris cDNA 5', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||| ||||||| . ||||||
ATGATGGAGGCAAGAATTTAT

EST sequence (targeted fragment marked with yellow):
TTTGTTTCTTATCATTTATCCTTACTCAATATTACTGCTGGCTGTTGCTAAAAAAAATACTCTTGGCACAGTTACATGGTCTAGCATTTCTTTTTATTAAATTCAACATGGCTCGACCTGATGAGTAGTGTTTGAAATATTGCCAAGCACCTACCCCCTCCTTTTTAAATAGATGACGTTTAGGACAAAAAAAAAGTTCATTTTGAACTAAATTTGATGTCCTAAACATCATATATTTAAGAACGGAGGTAGTATTCCCATGGGAACATGATATGCGTAAGTCCTGAGGTGTCAACAAAACTCTTAAACCGGACACAATATCTTTCGTTTGTGTGTACTATTTAGCTTAATGCATTGGGAAAATGTGATACTTCAGGACTTATGAGTTATGATGGAAGAAAAGCTACAATACTATTGTAACTTTGATTATCTGTTTTGAAAAAAAATGCTTTGAAAGGGGTTGACACCCTAGCCCTAGAGAAAAGGAAATAATGTGATCTCAGTTTGCTGCATTCTCAAGGTATATTTCCTGATATATATTTTTTTTTGTGAATGATCTAGTGCTTTTGTTTTTGACTTTTTATTTACTATGCATAATATTTGTTAGGACATTATGTGGAGACTGAAAAATAAATGGGGTTTATTACCTATACTGCTTTTTAGCCTGTCTTGTTATATTATATAATATCATTTTTGTAACCCTCATCACTTTATGTAGCCGTGTTCATGCCTT



gi|164118342|gb|EB664262.1|EB664262 26W_JR_B11 pAPO Cenchrus ciliaris cDNA 5', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||| ||||||| .|||| ||
ATGATGGAGGCAAGGATTAAT

EST sequence (targeted fragment marked with yellow):
CTCCCTCCGTTCCAAATTGTAGGTCGTTTTGTGTTTTCTAGGTTCATAGATATTATTATGCATCTAGACATAAACTATATCTAAGTACATACCAAACGTTATGCACCTAGAAAAGCCAAAACAACCTATAATTAGGAACGGAGGTAGTAGTATAGAAATACCTCATGGCAGCCGTGCTGATTTAGTGATTGTTATCTGCGGAAAGGATAGGGTCAGTAGACGACGACACTGGATCTGGGTATCATATTATTACTGTGCCTACAAAACACTTTTAAAACAGTTCTAGATCATATTTAAATACCGGAAAAGACTCGTGCTTTGAGCCAAATTTGTTCCATCCAGATTGAATTGTAAGACCTGGAGCCACGATGTGGTCCTGTTCTCTGTCTGCACTGCGTGGCATGTCGTATGTCTTGTTTTCACATGCACGCCTCGGGCAGTGGCCGTTGCACGTTTGAGTGAACCAGGTCAGAAAAGGTTGAGTGTTTCCTCCTACTCCAACTTGCCGTGAACCGTCCCAGAATCAGGAAAAGGACTTGAAGGCCTCCTCATGTCACCTCTGGATAGAAGTTGGTTGGGCTCTACGACCTTCACGTTGCANAATAAGGCTAATATCTCCCTGTATCCCATGCAACTTGCCTCGCGTCGTGCTATTTTGAGTATTCGTTTGAATAGGTCCAGACAAATCTGAGCACTAGAATCTCTACGGTTTGAGTTCTTGTGCGCATAACAAGTTTACCGTATGTGAAAGGGAACACATGCTTATGTTTTTCTTTTGTTGCA



gi|164204007|gb|EB663186.1|EB663186 4W6III_JR-rd_A12 pAPO Cenchrus ciliaris cDNA 5', mRNA sequence

TACTCCCTCCGTCTCTAAATA
||||||||||||||| |||
ATGAGGGAGGCAGAGTCATAT

EST sequence (targeted fragment marked with yellow):
CGGTCCCTTCTCTATATAGCAGCACATGCGGGAGACTTCAAATATTTTCTGATATACTTTGGTCTCTAATATCTACATTAAGTACCGTTTTCGACTAGTGTCTTGTAATGAATAATGCTACCGTTTGGATGGTTTGGTCAAAGTTTATCGAATTACTATCATTTTATTCTTCAGCGACAGAACCTTTTGATATGTATATGCAATTTGCATATATTAAATCTGAATGTGTCTTCTGCTCAACTTTAGCTAGTACTCTCTCCATCTCAGGATATATGACATATTTACACTTGACACTGTCACTAATACTAACATTTGACACTTAATATCTCGTAAAAAATAATTCTTATAAAACAAAATTATAGTCACATGAAAATATTTTTAACACAAATTCAATAATATTATTTTTGATACAAAAATTGTATTATTAGTAGGTCAATCGTTACAAAGTTTGAATCTTGATTTACGAGCGCGTCTTATATACTGAGACGGAGGGAGTATAAGCTGTAGCGCACCAACGCTGCGCCTCTAGCAATAAAGGCAAACCTTCAACTTTTGTTGCACATCTGCAATTCTGCATATCAACAAATTAAAGGAAACCTTTGAATTTTGTTTCACATTGGACCTAGCGATGAAAGAGTTGGTAAACTTGCACTACAAGAATTGATTAATT



gi|164143231|gb|EB666555.1|EB666555 83X_JR_C03 pAPO Cenchrus ciliaris cDNA 5', mRNA sequence

TACTCCCTCCGTCTCTAAATA
||||||||||||||| |||||
ATGAGGGAGGCAGAGTTTTAT

EST sequence (targeted fragment marked with yellow):
GAGATAGTCTCGAGTTTTTTTTTTTTTTTTTAACATAAATATTAATATATATTAGTATATATTTGGTTAAATTGTTTCTCCTCACTCGAAAGTGACACTTATTTTGAGACGGAGGGAGTACACCACAGAGACTAAAGCGATATATACATGTATACAGCCACAGCAACAACCAAGTAATAATAACCACTCAGCATTCACATAATTAGCTCCTTCAGGTGAAAGGAACTAACATAGGCCATGGCAATGAACTTGCGACCTCACCTGGGCGGTGATGTCTTGGATGCCAAAGATGCTATATAATCTGCAGCTTCATACAGCTCCTTCCTCCTCTGAGCAATCATTGCTTCCATAAACCCTTTATGCTCAGCTATGGATTCAAGAAGTTGCAGCAACTCGTTAGCAGCTGCCTGGGTTTCTTCCTCATTTCTTAGTATCGCATCCTGAAGCCTCTTCTCTGAATTCTTAAAAAATTCATCTGCCTCTTTTTCCACCAACCTCATTGCATTGTACTCTTTCTCCAATTCATCTTTCATACGTCTAGCCTCAGCTGTGCATCTTGAGTCATCAGTTGTGATTTCCAAATCCAGCAAATTCAAACGAGCAACCATCTAGACAAAAGAAAATACAAGAACAACATCAGCCAAGCTCTTCTCCTAAATAATTCTTTAGGATCACAATGAAAACAGACTGGGACAAAGAACCCAATAACACTAAATAAATGATACAAGCCAGAGTAACATAAGCAATGAAATGCTA



gi|164108434|gb|EB663308.1|EB663308 5Y_JR_A06 pAPO Cenchrus ciliaris cDNA 5', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||||||||||| . ||||||
ATGAGGGAGGCAAGAATTTAT

EST sequence (targeted fragment marked with yellow):
TGGGAGTAAGACTTACCTTAGCCATAATGGTTGATGTCTTGTATTTTAACTAGGTTTAATTATTGTAGTCATGTAGTGTTTTGTACAGGGTTGAGTGGTAGACTATCCAGAGTTCCAGACTTTACAGACCTGGCCTGTGGTGCAATTAATGGTGGCGGAGATGTCATTGATTGTCCTGTTCAAGTGACAAGAACCTGCTTGATACCATGAATGTTCAGATAACACCTTTCAGCTCTCGTGCTTCTGTTGATTCAGAAATTCAGGCAAAACAGAGAATCTTCACTTTCAAACTTGGGATTGCCTTAACAGTAGTATTTTGAAATGTGAGCTTTTGTAGCAATATTGACATAATTTGTTGATGTTGTTTTCTACGAAAAGTGGCAAAAACATTATAAATACATGAATGGCTTGCAAAATAAAAACACAAATTGATAAATAGCCTTGACTTTCCCTTTTCTTCATCCAAAATTTCCCCAGTCAGTGACTATTATCTTGTAAGGACCCAATGTACACAAATCAAGGAAATTTTCTGAAGTTATCTGACTTTCTAGCAATCGGAGTGGATAATGATTTGTCTTGTGTCATCATCATTATGGAGGTGATATTTCCACTCAAAGGTTAGCTTATTTTGATATGATCCCATAGAGCCAAACTTTATACGTGACTTCATATATCTACTGCCTCCGTTCATAAATATACGACGTTTAGGATAAGATAGTTTAAAAATGAACTAACTTGCTTGTACTAAATGTTATATATTTAAGAACGGAGGGAGTATTATGATTATGT



gi|164010697|gb|EB660193.1|EB660193 9W6III_JF_F11 pAPO Cenchrus ciliaris cDNA 3', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||||| ||||| . ||||||
ATGAGGAAGGCAAGAATTTAT

EST sequence (targeted fragment marked with yellow):
GAGATGACGAAAGTTGTTAACTCTACCCCATTTCTAATGCCAAGTGCTAGAAACAGTTTGCTGCCGATAGGTTCATCTGCTGGGAATTTAGGGAACAAGGATCCTGCAAACAGATCTGCTTATCTTCCTGCAAACTTTGTATTATCACCATTTCAGAGAAAGGACATTGTTATGCATGTGGAGGGTGTTACTGCCCTTCGCCAACTTGTACATAAAGTAGTCCACAATAATGAAGAACCAGCATTTGAGGAGCTTCCTCAGGAGAGATTGTCGCTGGATCTGGCGCGAGAGAAGGCGGCGTCTCTGCAAGCAAAACAGAAGCCACCGAAAAGAGATGGCTCTGTTACAGCTGCGGCTGTAGGCGCATCCCTTGGTGCGGGACTGGGAATTGTGATGGCCGTAATAATGGGAGCAGCGTCGGCTCTCCGAAAGCCATGACTCTTCATGCCTTGTTTTGATTTATTTTTTGTTTATGCTACCTTCGTTCTTAAATATATGATGTGTAGGACAAACTATTTAGTTCAAGATGAACTAATTTGCTTGTCATAAATGTCATATATTTAAGAACGGAAGGAGTAATTCTTTTTTTACTGTAGTACATATACAGTTTACTCATGTTCCAGGCGTGGAGCAATCTCCTGGGGAAAAAGGCACTAGATAGGGGGAAAGTAGATCGGAATAGGTAGGGGATAGTGCAGTGCCACATTTGGCTGTATATAGAATGAAATTTCTTGTTTATCCAAAAAAAAAAAAAAAAAAA



gi|164120971|gb|EB656901.1|EB656901 6Y_JF-rd_D04 pAPO Cenchrus ciliaris cDNA 3', mRNA sequence

TACTCCCTCCGTCTCTAAATA
|||||||||||||||||||||
ATGAGGGAGGCAGAGATTTAT

EST sequence (targeted fragment marked with yellow):
ACAAAGCAAAGACCAATCTGTGAGCCATTGAAGCTGGAAAATAGACAAAGTGGCTGGGATTGCTCAAAAAAGATACCAGCTGGAAAACAAAATTATAATAACCAGAAGGAGCCCTGGTCTTTTGTAGGAGGCGCAGGGGACATCAATAACCAAGAGAAGCCTCCAGTATCTAAAACTTCTCAAACATACTATCCTGTCGCAAATGGTCAACCATTGGAGACTATTGAGTTTGGATCTTTGGGACCTTTTGCATTGAAGTCGAGCAGAGCTACTAACACACAAACTGGCAGTAAGGTGCTTACATTTGCTTCTCCACTGGTGCTACAGAGGTCTAGGGCTGCCACAACTGAAAACAGGCCACCAGGATTTTGCAAGGTAGGAGATGAAGATGAATTCCCACCTCTTAGTGCTGGGATCCGGTGAGAACTTACATAGGTACAGACGAATACAACTGATCATAGAGTTAGCGGAAGGAGCTGACCAGCTGAGCTTTGTGCAGAATTTTCTTGGGAGCATAGATATGAGGATCGGAGTGGCATAGTATAACATATATTGTAAAAATTTCGTTGATACCTTCTCTCTCCTCACCCCTTTATCTTATTTTCCTGTCCATAGTTTAGTTACACCGAAAGCTTATACAGTTGTGTTCAGTATAACTTAGCAAGGAGAAAATATCAGATAAAAATACTTACCCTCCGTCCCTACGAACGACACTTATTTAGAGACGGAGGGAGTAGGTTCGGTGTACATTCCATATTGCCTAGTTGCATTTGCTTTTCTGTGCTTCAAAAAAAAAAAAAAAAAA