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mature miRNA: TCATGGTCGTGATCATGGTTG
species: Physcomitrella patens
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|208393249|gb|DC908072.1|DC908072 DC908072 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp

TCATGGTCGTGATCATGGTTG
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AGTATCGGCACNAGTACCACC

EST sequence (targeted fragment marked with yellow):
GCTTCTATGCTTGCTTAGACGTGTAGCGTTTTTCTGTATGGGATAGGATACCCTTGTGGTTCCTGGACGGGACGTTTTGGTGATGCTTTTGAAAATTTCCTTAGGAGAGGTTTGACGGTTTGTGTTGGGAATTGGGGAGGTTTTGAAGTGATGAGGGGAGACATGGCGACTTGGCTGCGCGTCGCGGCGGTTGTAGCCGTGGTGTGCTTGGTGGGTGTTATGGCTGAGCAGCCGAAGTCCGCAGGGGAGTTTGTGGCGNTGCACAGGAATTTCCCTAGGACTGTGCGGGTGGTGTCCCAAGAGGATGGGATCGCTGCCCGTGGCCATGGCGATGAGGAGCATGTGGATGGTAACAAAATGCACTGGAGTTTTAATCTGTTCAAACCCTTCCAGATGTTCGGNGTACAAANAGAAGGCCATGAGCACAANAAGTGCAAAATGGGTGCTAAANTAGGTTTGTGGTGNTCACATATGTTTGGGCATGGTCGTGATCATCATTACCACCACCACCNCCACAATGAGCACGGGTTTGAGAANGATGTGGAGCACCGTCACTTCCGCCACCATGANCACGGCTATGAACACANGNTTGAAAAGGATACNGAGCACCATCATTGNCTACGTCCTTCATTTGCATGNAGTTTACTCGNCNAGATTGGCCNGTGGTTTTCTGGAATCCCATCCTTCTTTTCCGACATGGCTCACGTNAANA