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mature miRNA: TGACAGAAGAGAGTGAGCATA
species: Centaurea solstitialis
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|124693443|gb|EH788179.1|EH788179 CNSS28214.b1_L21.ab1 CNS(LMS) yellow starthistle Centaurea solstitialis cDNA clone CNSS28214 

TGACAGAAGAGAGTGAGCATA
|||||| |||||| ||||||
ACTGTCCTCTCTCTCTCGTAC

EST sequence (targeted fragment marked with yellow):
ATTCTATAAAGACTGTATTCACTCTCTTTCTAGGGCATGGAAACAACAAAATCTGGAAGGGTAGTCAAAAGCATGAACGATAGGTTGAAAAATGAGATGATGGAAGAAGGGGAAGAAGATGATGACGAAAACTTTGGTGAGGGTAGTAGGAAGAAGAAGGTACTGGGAAAGAGGGGGTCGGGTAGTGGAGGGTCCATACAGCCTTGTTGTCAGGTGGAAGGTTGCACTACTGATATGACTAATTGCAAGACGTACCACCGGCGGCATAAGGTATGTGAACTTCATGCCAAGGCTCCAATTGTCCTCACCGGTGGATGTCAGCAGCGATTCTGTCAGCAATGCAGCAGGTTCCATGACCTAACAGAATTCGACGATGCTAAAAGGAGTTGTCGTAGGCGTTTGGCTGGACATAATGAACGCAGGCGTAAAAGCTCCTATGAAACTTATGGAGAAGTTCCTGATTATAAATGAAAAAAAGAGTTCTTAATGATGAACCAGATGTTTAGAGACATTTCCAAGGAAGAGCCTCGCCAACTACTCATAAATAAGACAATATAACTATGTCCGCTATCATGCTCTCTCTCTCCTGTCAGTCCATTAACTTCAATTATCTAGAAGTGTTGATGTGTAAGTATATATGATGAACTTCGTAAGGATGTCCGAAGCAGTAGAACCGTGTACCAGCCAATTATACTATCTTTATGATCACTTTCTGGGTGC


gi|124656217|gb|EH750962.1|EH750962 CNSL10316.b1_H12.ab1 CNS(LMS) yellow starthistle Centaurea solstitialis cDNA clone CNSL10316 

TGACAGAAGAGAGTGAGCATA
||||||||||||| ||||  |
ACTGTCTTCTCTCTCTCGGCT

EST sequence (targeted fragment marked with yellow):
GCGGGGATCTCGAATCACTGATTGTGTGATCTTAAAGCAAGTATCAAGAGTTTCTGGAACCACTGATCCATTCTAGATAGCTAAACGGAGATCTCAAGTAGATTTAGAGATTCTAACGGGGTTAATCGTCCGTTAGCGTCAATCCTGTTCAGATCGATTGTTTGGTTGTAAGTTTGAACAAAGATTCAACGCAATACATGGGAAGTAACTGGGGTATCCACCTGTAAGTCTTTACCAGGTAGAGCAAGTCTTTACCGGGCAGAGGAGCAAGTAAGTCTTTACCTACCGGGTAGAGCAAGTATCTGTCCTTATCGTAAGGTTTTGCGTGGTGGAACCTTGGCCAACTCTATCGGCCGGGAGGGGGCCGGTCACAATCGACTATCTCGGTAGAGATTGACAGGGGGATTTTGTTACGCGGGGACAAAATCCTAAAACGAACGAATGACGTTTAGGTAAACTATCTTTAATGGCTTCATGTTTCGCGGGCGTAGCTGCCCCATCCTTGTCCAGTAGCATACTTCCAACGATAGAAGTTGTCCCTTATCCGAGCATAACCTTGTTCGTCCAGCGAACATGGCATAGTTCGAGTGTTGCTAACGTCTACCTTTTGATAATGCTCAAGGACGCACGGATAATACAAATCGACAATAGGAAGTAGAAGTAGCCGTTCCGTTCACTAAAATGATAAGCGGGGTCGTCCAGGTTACTTAGTGGATTCTGAGTGGGAGTAGGAACTTTTGTAAAAAGCTTTGAGATCGGCTCTCTCTCTTCTGTCAAACAAAAAATAGGCTTTTCTCTATTGNTAGATGGAGAAAGGCCCGCGAAAGGGAACAGCTCTCAGTACTAGAAGGCGGGTATTGATC


gi|124667506|gb|EH762246.1|EH762246 CNSL8245.b1_J21.ab1 CNS(LMS) yellow starthistle Centaurea solstitialis cDNA clone CNSL8245, 

TGACAGAAGAGAGTGAGCATA
||||||||||||| |||| |
ACTGTCTTCTCTCTCTCGAAC

EST sequence (targeted fragment marked with yellow):
GGGGGACAGAAGATCTGGGAGGGTGGTGAGGAGGAGTATGGACGACAAGTATAAGAACGAGATGATGGGAGGATGGGAAGAGGATGATGATGGAACAACTTATTTGGAGGACACTAGGAAGAAGGCAACAATGGCAAAGAGGGGCTCCGGCAGTGGGGGATCCACGCAGCCTTTTTGCCAGGTGGAAGACTGCACCACCGATATGAGTAGGGCCAAAACATATCACAGGCGACACAAAGTCTGTGAGGTTCATGCCAAGGCTCCAATTGTTGTAATCGCTGGACGTCAACAGCGTTTCTGTCAGCAATGCAGCAGGTTTCATGACCTCACAGAATTTGATGACACCAAAAGGAGTTGCCGTAGGCGCTTGGCTGGTCATAACGAGCGAAGACGTAAAAGCTCCTATGAATCCTATGGTGAAACTTCTGGATGATAAAGAAGAGCATATCACCAACTCCTGATCAAATAAGACTTATAATTATATATCCATTAGCAAGCTCTCTCTCTTCTGTCAGTCCTTAAATGGACTTTATTAAGTATCGGTTATTTATGTTTTTATCCATATTTAGTATTACGGTTTAGCAAGAGCTTTACCTATTTTCGGCGCATGGCCCACGGTTGTACACTTGTACTTCATAAATTGATGGCATTAGCTAAT