| mature miRNA: TGATTGAGCCGTGCCAATATC species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|120533511|gb|EH261644.1|EH261644 JGI_ACBU6152.fwd ACBU Phakopsora pachyrhizi infected soybean leaf tissue 6-8 days post inocu TGATTGAGCCGTGCCAATATC EST sequence (targeted fragment marked with yellow): TCATCCACCAATAGAGCCTCTGGATGAGAAGCTACAAGTTCTCAATCCTCAGTTCATTTTGAACCAAAATCAATCTCAGTTTATGCCAAACGCGGGTTTGGTTTTGCCTTTGACATATGGCCAACTGCAAGAAAATCATCAACTTCTCCCTCAGCCTCCGGCAAAACGCCTGAATTGTGGCCCAAATTATCAGGTTCCAAAGACACCCTTTTTGGACTCTGGCCAAGAGCTGTTACTTCGGAGGCAGCAACAGCAGCTCCAACTGCTTCCTCACCATCTTCTGCAGAGGCCATCCATGGTGGTGGCACCAAAGCAAAAAATGGTGAACTCCGGTGGCCAAGACTTGGCGACCCACCAGCTTCAACAGGCTATAACTGAACAGCTTTTCAAAGCTGCAGAGCTGATCGATGCAGGTAATCTGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAACTTTCTCCCATTGGGAAGCCTTTTCAGAGGGCTGCTTTTTATTTCAAAGAGGCCTTGCAATTACTTCTCCATTCAAATGCCAACAACAGTTCTTTCACCTTTTCACCCACCGGCCTTCTGCTCAAGATTGGTGCTTACAAATCATTCTCAGAAATCTCACCAGTTCTGCAGTTCGCTAATTTTACTTGTAACCAAGCACTGCTTGAAGCTGTGAAAGGGTTTGATCGCATTCACATAATAGATTTTGATATTGGGCTTGGTGGACAGTGGTCTTCTTTCATGCAAGAGTTAGCACTCAGGAATGGCGGTGCACCTGAACTCAAGATCACTGCATTTGTGTCACCCTCC | |||||||||
gi|120531221|gb|EH259354.1|EH259354 JGI_ACBU622.rev ACBU Phakopsora pachyrhizi infected soybean leaf tissue 6-8 days post inocul TGATTGAGCCGTGCCAATATC EST sequence (targeted fragment marked with yellow): AACTCACTAAGAAGCTTAGTGAAGCCAACCGGCAAAATCGGTTCCTTAAAAGACAGTTGAATGTAACGGAGGATGCATTGGTAAAATTCCAAAATGAACTTGCAGTCATGGAGCTTGAAATTCAGGCCTTGGCCAGATTAGCAGAAGAAATAGCTCAATGTGGTATTCCAGAAGGTTCAAGGAAGATCAATGGAAAGTACATTCATTCTCACCTTGTTGCTAGATTAGAAGCTGTAAATGAACAACTGAAGGAACAAATAAAGGATGTTGATGCGGCACAATCAAAGGAGGTTTCTGTGTTTTGGGTTGGCATGGCTGAGAGTGTGCAAGTTATGGGCACCTTTGATGGCTGGAGCCAAGGAGAGCACCTTTCACCTGAGTATACTGGTTCTTACACAAGGTTTTCAACTACATTGTTGCTTAGGCCAGGAAGGTATGAAATCAAATTCTTAGTAGATGGTGAATGGCATCTGTCACCAGAGTTTCCCATTATTGGTGAAGGGTTAACCAAAAATAATTTGCTAGTTGTTGAGTAATGAATTAATGATTCATATTTTCAATCCTAGTAACTGATACATAAGCAGAAACTTGAGTGTTATTTTCTTAAAGTTATTTAAATTTTCTTTCTTTGGTGTATAGGCACACACACTTTTTTGAGTGTTTTGTGTTGCTACACTATTTGATC | |||||||||