| mature miRNA: TTGGATTGAAGGGAGCTCTA species: Populus nigra database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|161902970|gb|DB884713.1|DB884713 DB884713 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TTGGATTGAAGGGAGCTCTA EST sequence (targeted fragment marked with yellow): ATAGAGAAAAAATGGCAACAATCTCATCTCTTGCAACACCACTACGCACGTCCACAAAACTTGCTCTTTCAACAAACCAGTCAAAACCCTCTTTCCAAATCCTCAAACCAGCAAACCCTTTTAACCATTTCCCTAAATTCACACATTTACATAAAATTCTAAACACCAAAGCCCCCCGAAGGCTCTTTGCAGTAGCTGAAGAAACAGCACCGGCTGCTGCAGTAGACCCTTCGTCAGAGGCTGCTAGGAGGCTGTACGTTGGAAATATTCCCAGGACTCTGACTAATGAGGAGCTTACAAAGATTGTTGAAGAACATGGTGCTGTTGAAAAAGCTGAGGTTATGTATGATAAGTACTCGGGTAGGAGTCGTCGATTTGCATTTGTTACGATGAAAACTGCTGAGGATGCAAATGCGGCAATTGAGAAATTGAATGGCACTGAAATTGGAGGCCGTGAGATCAAAGTAAACATCACGGAGAAGCCTTTGCAGTCATTAGATCTGCCTTCTATCCAATCAGACGAGTCCCAATTTGTTGACAGCCCTTATAAGGTTTATGTGGGAAATCTTGCTAAAACAGTAGCGACA | |||||||||
gi|161919998|gb|DB899119.1|DB899119 DB899119 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TTGGATTGAAGGGAGCTCTA EST sequence (targeted fragment marked with yellow): ACGTAACAAAACAGGACAAAGAGATGTGATTCGACGGCAGTCCAAGCACACAATCGGAGTTCGGAGGAGTTGGCTGACTGTTGTTATTTTGTCGCTTCGGGGGACACTTATGGACGTTCACGTGCTCTCTGTCAGCACTTCATATATAGTTTTTATTATTTAGTACTTTTTATTATTCTATCACGTGTTTTTATTTTTTTTTAATTTGAGAGGTAAGAGGTTTTGCTTCGGGGAGGAACGCGTGGAATTATTGTTGTGTCCGTGCATGCATTTCTTAGACAGACATGATCCTCTCCTAAAACTAGGTATCTTTGATTCCGTACGGATCATACAACATTTTTGTATGGTTTTATTTAGGGGACTCTTTAATCCAATTCTATGTGTACACGTATTAAAAAAAGCTAGATAAGGGCAACATCTCATTCCATTGACCCTCCTCCCGATGAGGTGGCCCCAGCCAAAGAAAACATTGTTTTGAATCAACGCTACACGTCAGTCAGGCCACCGGTGAAATGACCCACAAGTCCCTTTCCACCTCCGTGAGATATTCACAGTTTCTGCCTTCTTCAGTCATCAGATGCATGATGAGCCGGTCAGCCTGTGAACTCAAAATATTATGATTATATGATTTTTTTATTGTTGTTCAG | |||||||||