mature miRNA: GAGCCAAGAATGGCTTGCCG species: Bruguiera gymnorhiza database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|53826113|gb|BP951612.1|BP951612 BP951612 Bg05 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg05-18_M05 5', mRN GAGCCAAGAATGGCTTGCCG EST sequence (targeted fragment marked with yellow): GTTTATAACTGTCCTAAATGGAATTTGCAATTATTTTCCTGTGCAGTTACTTGTGGTTGTATCATGCATGTCTATAATTATTTGTCAGCTCGGTATTGAAATTTCAGAAACTTTGAAAAAAAAACAAATCTAATGTTTACCCCTTATTACTTGATGTGGTAAATTTTGGGTTTCATTTTGTAGAAACAAACTTAAAGGGAAGAGGGTTTCGATTTTGATCTACTACTGGAACTGCTGGATTCAGTTACTTGTTTCGACTGCTTCAAGGTTTTAAAAAATGGGATCTCATCTGAACTTCAGGAATTTTGGTGCCACCTCTCCTGGAGAGGGCAGTGATGCCAAGCCATCCGGGAATCCATTGTTGGCTCGCCAGTCTTCTGTATATTCCTTGACTTTTGATGAGTTTCAGAGCAACTGGGGTGGAGGACTTGGGAAAGATTTTGGATCACTGAACATGGACGAGCTATTGAAAAACATTTGTACTGCTGAAGAGACTCAGGCTATGACAAATTCAATTGGTGTTGGAGAGGGA | |||||||||
gi|124544132|gb|DB995026.1|DB995026 DB995026 Bg05 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg05-12_O05 5', mR GAGCCAAGAATGGCTTGCCG EST sequence (targeted fragment marked with yellow): GAGAGGGGGGGAAACAAAAAAAAACCAAAAAAAACAAAACAATAAAAAACTCCTGTGCTTGGCGCCGGGGCTCAGATCTCCTTCGGGTATGTGTAGCCAGACCATCTCTTTCGACTTAGCTCCCTCCCGACTCCACGAATCAAAACTGGGGGGGATCGATAAATAGAACGCTGCCTTTACTCTTCTGACCCCCTCGACCGCACTGCCGGTCCGTCAGGAAGAACACTTTCGCACGCGACGTTGGGGGGGGGGGGGGGACCCTATCTCCCTCACCGCATGTTCTGTTGCTGGCCCGCCAATCGCCTGCATTGGCTACCGCACGTCATTCTTCGCTCATTGTCATGACCTCCAGTACCCCACTCCTCCACTCTTCACGTGCCACACTCGAGCCTTGCTGTATCGCGTATGTGTCACATCTGAACGGGTCCCCTGCACTCAAGTGCGCACCGCGACCGCTCCCACGGTAGCTGGTCTCACCCCTCGGGCCCCCCCACTGCAACCTCTACCACGTTCTGACGCGCCATACGTCCCTCCCAGAGATCCCAATGAGCCAAACGTGCTACGGACGGAACAATGAGCTTCCGTACCACAACACCTCATAGCCCATCCCTCGGATAGGGAGACAGTCTTAGTATACTGACATCCAGGACACTGATTCCCATGAGGCTCTGTTGCCACACTGCCGCCTGGCGACAATGGAAACACGTCGAACCCGCCAGCCGCTCTGTATTCAGTGGACATGACGCCCTGCGTGCTGCCTTAGGCCACCTACTCACGTCCCCCCGCCGCGCGGTATACCTCCCCCGTATGA | |||||||||
gi|53819400|gb|BP944899.1|BP944899 BP944899 Bg04 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg04-03_N04 5', mRN GAGCCAAGAATGGCTTGCCG EST sequence (targeted fragment marked with yellow): AAACAGTTAGACTGCCAAAAGCACGAGTCTCGCTCTAGAATCCGCCTGGTCCAGAAGGCCATTTTTGGCTCTGTAATTTGCGTGATTGGATCCGCCCTCGCCGTTGCTGTTTCTGCTGCAGCAATTGCGACACACGGTCTCTTGGGCATCGTCGCTTGCCCCTTCTGCGGTTGTGCAAATCTTACTCGCAAGCTCACTAAGAAAGAGCGTGCCCATTGGAAGCAACTCGATGATGCGGCTAGAAGTACGTTTGCACTGAAAAATGATCTTAGTACTATTGGTTGTCTTGTTACCCGTTTATATGATGATGTTGAAGGCGATAGGCATCTTATTCGACTTGGATTGGAGAGGGGGAAGAGACAGGTATA |