| mature miRNA: TCCGGAGGGATGCCTTCCTTA species: Gerbera hybrid cultivar database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|58325170|gb|AJ758242.1|AJ758242 AJ758242 G00004 Gerbera hybrid cultivar cDNA clone G0000400003B11F1, mRNA sequence TCCGGAGGGATGCCTTCCTTA EST sequence (targeted fragment marked with yellow): GCCCTATCGGCGAAAATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACGATCACCTTGGAGGTCGAATCCTCCGACACCATCGACAACGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCCGGACCAACAACGTCTCATCTTCGCCGGTAAACAGCTCGAGGACGGCCGAACCCTCGCCGACTACAACATCCAGAAGGAATCAACTCTCCACCTTGTTCTCCGACTCCGCGGTGGCGCGAAGAAGCGCAAGAAGAAGACCTACACCAAGCCGAAGAAGATCAAGCATAAGCACAAGAAGGTGAAGCTTAGCGTGTTGCAGTTCTACAAGGTTGATGATTCCGGCAAGGTCCAGAGGTTGAGGAAAGAGTGTCCTAATGCTGAATGTGGCGCCGGAACTTTCATGGCGAATCATTTTGATAGGCACTATTGCGGTAAGTGTGGTCTCACTTATGTTTACCAGAAGGCTTAAGGTTTGATCTGATTAAATTAGTTAAGTATCAATTATCAGTTATGAGTTTTCAATTATGATTCTGGATTTTCTAGTTATTTTGCGTA | |||||||||
gi|58326105|gb|AJ759177.1|AJ759177 AJ759177 G00004 Gerbera hybrid cultivar cDNA clone G0000400016D09F1, mRNA sequence TCCGGAGGGATGCCTTCCTTA EST sequence (targeted fragment marked with yellow): CTCCCACACCATCGATAATGTGAATGCGACAATCCCACACAAGGAGGGAATCCCGCCGGACCACCAGAGGCTGATCTTTGCTGGAAAACAGCTGGAAGATGGGCGGTACGTTGGCCGACTATAACATTCGAAAAGAGTCAACGCTCCACCTGGCTCTCCGGCTCCGGGGAGGGATGCAGATTTTCGTGAAGACATTGACGGGGCAAGACGATTACGTAGGAGGTGGAGAGTTCTGATACCATCGATAATGTGAAGGCGAAGATTCATGATAAGGAGGGGATTCCGACGGACCAGCATAGGCTGATGTTTGCTGGAGAACAGCTGGAGGATGGCCGGAGCTTGGCGGATTATAATATCCAGAAGGAGTCTACTCTTCACCTTGGTCTTCGTCTGCGTGGTGGTTTTTGAAGCTCCGATGTT | |||||||||
gi|62942397|gb|AJ761186.1|AJ761186 AJ761186 G00005 Gerbera hybrid cultivar cDNA clone G0000500017B07F1, mRNA sequence TCCGGAGGGATGCCTTCCTTA EST sequence (targeted fragment marked with yellow): GGTCAAAGCCAAGATCCAGGACAAGGAAGGTATCCCACCGGACCAGCAGAGGCTAATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACCTTGGCCGACTACAACATCCAGAAGGAGTCGACTCTCCACCTTGTTCTCCGTCTCCGGGGAGGTATGCAGATTTTTGTCAAAACCCTCACCGGAAAAACCATCACTCTCGAGGTAGAAAGCTCCGACACGATCGATAATGTGAAGGCGAAAATCCAAGACAAGGAGGGAATCCCGCCGGACCAGCAGAGGCTGATCTTTGCTGGAAAACAGCTGGAAGATGGGCGGACGTTGGCCGACTATNACATTCAGAAAGAGTCAACGCTCCACCTGGTTCTCCGGCTCCGGGGAGGTATGCAGATTTTCGTGAAGACATTGACGGGGAAGACGATTACGTTGGAAGGTGGAGAGTTCTGATACGATCGATAATGTGAAGGCGAAGATTCAGGATAAGGAGGGGATTCCGCCGGACCAGCAGAGGCTGATTTTTGCTGGAAACAGCTGGAGGATGGCCGGACCTTGGCGGATTAAATATCCAGAAGGAGTCTACTCTTCACCTTGT | |||||||||
gi|62940965|gb|AJ759910.1|AJ759910 AJ759910 G00005 Gerbera hybrid cultivar cDNA clone G0000500001A05F1, mRNA sequence TCCGGAGGGATGCCTTCCTTA EST sequence (targeted fragment marked with yellow): GCAAAGATGCAGATCTTCGTGAAAACCCTAACGGGAAAGACGATAACCCTAGAGGTCGAATCCTCCGACACAATTGACAATGTGAAAGCCAAGATCCAAGACAAAGAAGGCATCCCACCGGACCAACAACGCCTCATCTTCGCCGGAAAACAGCTCGAGGACGGCAGAACCCTGGCCGATTATAACATTCAGAAGGAATCCACTCTCCATCTTGTCCTCCGTCTCCGTGGTGGTGCGAAGAAGCGTAAGAAGAAGACCTACACAAAGCCTAAAAAAATCAAGCACAAACATAAGAAGGTCAAGCTTAGCGTATTGCAGTTTTACAAGGTCGACGATAATGGAAAGGTTCAGAGGTTGAGGAAGGAGTGCCCTAATGCCGAGTGCGGTGCCGGGACGTTCATGGCGAATCACTTTGATCGACATTATTGCGGTAAGTGTGGCCTCACTTATGTTTATCAGAAGGCTGGTGGTGATTAATTTCTACTTGTTTTATTAACTTTTCGTTTAGATTTACTTTCCAGCAGTAATGTTGCACTGCGATTCAAACATTCATTATAAGTTTTTGCCTTTATGATATGACATATGATACTTAGTTGCGAAAAAAAAAAAAA | |||||||||
gi|58329462|gb|AJ765797.1|AJ765797 AJ765797 G00008 Gerbera hybrid cultivar cDNA clone G0000800020B09F1, mRNA sequence TCCGGAGGGATGCCTTCCTTA EST sequence (targeted fragment marked with yellow): GAGATATTTGTGAAGACTCTGACCGGCAAGACTATCACTCTGGAGGTTGAAAGCTCGGATACGATTGATAATGTCAAGGCAAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCAGCAGAGGCTTATCTTTGCAGGGAAGCAGCTTGAGGATGGACGTACCCTTGCTGACTACAATATCCAGAAGGAGTCCACCCTCCACCTTGTCCTTCGTCTCCGCGGTGGGTGTTGAAGGTAATGCCTTGCTTGTGCTTCTTCCATCTTTT | |||||||||
gi|58323354|gb|AJ756426.1|AJ756426 AJ756426 G00003 Gerbera hybrid cultivar cDNA clone G0000300004B07F1, mRNA sequence TCCGGAGGGATGCCTTCCTTA EST sequence (targeted fragment marked with yellow): GGATAAGGAAGGCATCCCTCCGGACCAGCAGAGGCTTATCTTTGCAGGGAAGCAGCTTGAGGATGGACGTACCCTTGCTGACTACAATATCCAGAAGGAGTCCACCCTCCACCTTGTCCTTCGTCTCCGCGGTGGGTGTTGAAGGTAATGCCTTGCCTGTGCTTCTTCTATCTTTTGGGGTTCTTCGATGCTTTGTGGTTAAATAGTGTATGTTCTCGGATTTCAAGTGTCAGTGACGCCTGATGCGTGTGTGGTTGAATAATAATAACAAAAAACTTGTTTGGTAAAAAAAAAAAAAAAAAAA | |||||||||
gi|58327965|gb|AJ764300.1|AJ764300 AJ764300 G00007 Gerbera hybrid cultivar cDNA clone G0000700016E06F1, mRNA sequence TCCGGAGGGATGCCTTCCTTA EST sequence (targeted fragment marked with yellow): CTCCCAATCGGCGAAAATGCAGATCTTCGTGAAGACCCTAACGGGTAAGACGATCACCTTGGAGGTCGAATCCTCCGACACCATCGACAACGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCGCCGGACCAACAACGTCTCATCTTTGCCGGTAAACAGCTTGAGGACGGCCGAACCCTCGCCGACTACAACATCCAGAAGGAATCAACTCTCCACCTTGTTCTCCGACTCCGCGGTGGCGCGAAGAAGCGCAAGAAGAAGACCTACACCAAGCCGAAGAAGATCAAGCATAAGCACAAGAAGGTGAAGCTTAGCGTGTTGCAGTTCTACAAGGTTGACGATTCCGGCAGGGTGCAGAGGTTGAGGAAAGAGTGTCCTAATGCTGAATGTGGCGCCGGAACTTTCATGGCGAATCATTTTGATAGGCACTAATTGCGGTAAGTGTGGTCTCACTTATGTTT | |||||||||
gi|62942397|gb|AJ761186.1|AJ761186 AJ761186 G00005 Gerbera hybrid cultivar cDNA clone G0000500017B07F1, mRNA sequence TCCGGAGGGATGCCTTCCTTA EST sequence (targeted fragment marked with yellow): GGTCAAAGCCAAGATCCAGGACAAGGAAGGTATCCCACCGGACCAGCAGAGGCTAATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACCTTGGCCGACTACAACATCCAGAAGGAGTCGACTCTCCACCTTGTTCTCCGTCTCCGGGGAGGTATGCAGATTTTTGTCAAAACCCTCACCGGAAAAACCATCACTCTCGAGGTAGAAAGCTCCGACACGATCGATAATGTGAAGGCGAAAATCCAAGACAAGGAGGGAATCCCGCCGGACCAGCAGAGGCTGATCTTTGCTGGAAAACAGCTGGAAGATGGGCGGACGTTGGCCGACTATNACATTCAGAAAGAGTCAACGCTCCACCTGGTTCTCCGGCTCCGGGGAGGTATGCAGATTTTCGTGAAGACATTGACGGGGAAGACGATTACGTTGGAAGGTGGAGAGTTCTGATACGATCGATAATGTGAAGGCGAAGATTCAGGATAAGGAGGGGATTCCGCCGGACCAGCAGAGGCTGATTTTTGCTGGAAACAGCTGGAGGATGGCCGGACCTTGGCGGATTAAATATCCAGAAGGAGTCTACTCTTCACCTTGT | |||||||||
gi|58327344|gb|AJ763679.1|AJ763679 AJ763679 G00007 Gerbera hybrid cultivar cDNA clone G0000700007E06F1, mRNA sequence TCCGGAGGGATGCCTTCCTTA EST sequence (targeted fragment marked with yellow): GGTTAAGGCTAAGATCCAAGACAAGGAAGGAATCCCACCAGACCAGCAGCGATTGATCTTTGCCGGTAAACAGCTGGAGGACGGCCGTACCCTTGCAGATTACAACATCCAAAAGGAATCAACACTCCACCTGGTTCTCCGTCTTCGTGGTGGTATGCAGATCTTTGTGAAGACATTGACCGGCAAGACGATCACTCTAGAGGTTGAAAGCTCGGATACGATCGATAATGTCAAGGCAAAGATCCAAGACAAAGAGGGGATCCCACCAGACCAGCAGCGGTTGATCTTTGCTGGTAAACAGCTTGAGGATGGTCGTACCCTTGCGGATTACAACATCCAAAAGGAATCAACCCTCCACTTGGTTCTCCGNTCTGCGGGGTGGTATGCAGATCTTTGTGAAGACTCTGACTGGCAAGACTAATCACTCTGGAGGTTGAAAGCTCAGATACAATTGATAATGTCAAGGCAAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCAGCAGAGGCTTATCTTTGCAGGGAA | |||||||||
gi|62940883|gb|AJ756091.1|AJ756091 AJ756091 G00002 Gerbera hybrid cultivar cDNA clone G0000200058F08F1, mRNA sequence TCCGGAGGGATGCCTTCCTTA EST sequence (targeted fragment marked with yellow): AAGCTCCGACACCATTGATAACGTCAAAGCCAAGATCCAGGACAAGGAAGGTATCCCCCCAGACCAGCAAAGGCTTATCTTCGCCGGCAAACAGCTAGAAGACGGCCGTACACTCGCCGACTACAACATTCAGAAGGAATCCACCCTCCATTTAGTCCTCCGTCTCCGTGGAGGCATGCAAATCTTCGTCAAGACCCTCACCGGAAAAACGATCACTCTTGAAGTAGAAAGCTCCGACACCATTGATAACGTCAAAGCCAAGATCCAGGACAAGGAAGGTATCCCCCCAGACCAGCAAAGGCTTATCTTCGCCGGCAAACAGCTGGAAGACGGCCGTACACTCGCCGACTACAACATTCAGAAGGAATCCACCCTCCATTTAGTCCTCCGTCTCCGTGGAGGCATGCAAATCTTCGTCAAGACCCTCACCGGAAAAACTATCACTCTTGAAGTAGAAAGCTCCGACACCATCGATAACGTCAAAGCCAAGATCCAGGACAAGGAAGGTATCCCACCGGACCAGCAGAGGCTAATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACCTTGGCCGACTACAACATCCAGAAGGAGTCGACTCTCCACCTTGTTCTCCGTCTCCGGGG | |||||||||
gi|58328669|gb|AJ765004.1|AJ765004 AJ765004 G00008 Gerbera hybrid cultivar cDNA clone G0000800009C09F1, mRNA sequence TCCGGAGGGATGCCTTCCTTA EST sequence (targeted fragment marked with yellow): GTGTAAAGGCAAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCAGCAGAGGCTTATCTTTGCAGGGAAGCAGCTTGAGGATGGACGTACCCTTGCTGACTACAATATCCAGAAGGAGTCCACCCTCCACCTTGTCCTTCGTCTCCGCGGTGGGTGTTGAAGGTAATGCCTTAATTGTGCTTCTTCTATCTTTTGGGGTTCTTCGATGCTTTGTGGTTAAATAGTGTATGTTCTCGGATTTCCAGTGTTAGTGACGCCTGATGCGTGTGTGGTTGAATAATAAATAACAAAAAACTTGTTTGGTAATTTATTGGCCTCTTTTTACTTTCTGTTTTNTTCTGGTTTTGTTCATAATTAAGGGGGGTGAGTTTGATCAAAAATAATGAATTTATGATGGTTAATACAACAAAGTTTCGATGTTCTCAATTAGCATGGTGCGTAGGTTGCCTAGTCATGACTGTTAGATTTGTGCGTTTGTTGTTATCGTGTCATGTGCCTATGGTCTTTGTACGTGTAGCACACAATTAGGCAAATTTAGGTTTATATATAATTTCCCAATTATGTGTGTAATGTGTGTGTCAATGAGTTGTTTGTGAGTGCACAATTT | |||||||||
gi|58322881|gb|AJ752227.1|AJ752227 AJ752227 G00001 Gerbera hybrid cultivar cDNA clone G0000100034D11F1, mRNA sequence TCCGGAGGGATGCCTTCCTTA EST sequence (targeted fragment marked with yellow): CAAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCAGCAGAGGCTTATCTTTGCAGGGAAGCAGCTTGAGGATGGACGTACCCTTGCTGACTACAATATCCAGAAGGAGTCCACCCTCCACCTTGTCCTTCGTCTCCGCGGTGGGTGTTGAAGGTAATGCCTTGCCTGTGCTTCTTCTATCTTTTGGGGTTCTTCGATGCTTTGTGGTTAAATAGTGTATGTTCTCGGATTTCAAGTGTCAGTGACGCCTGATGCGTGTGTGGTTGAATAATAATAACAAAAAACTTGTTTGGTAAAAAAAAAAAAAAAAAAA | |||||||||