| mature miRNA: GAGAAGGAGGAACAACCCGAA species: Helianthus annuus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|90463587|gb|DY925466.1|DY925466 CHAY8974.b1_L11.ab1 CHA(XYZ) common wild sunflower Helianthus annuus cDNA clone CHAY8974, mRN GAGAAGGAGGAACAACCCGAA EST sequence (targeted fragment marked with yellow): TACTGGAATAGTTGAATTCTGATTCTGACATGACAAAGTGTCTGCGCTGTTGTAGACCCTTCCGGGAAAGAAGTCTAGCAGCAGCAAATCCTTTTATGAAGCTCCTTTACGTACTTCTTTGAAAATGTTCCACCAACCTGAGGAATCAAGAAGTTCAGATCGTCTGCTTGCTCCAACTGCGTTCGCAAACCATCCTGATATTCCTTCGATTACTGCCCCCTTCTCGACAGTGTGACGCTGTTTATTTACCGCCTTATATAATCAGTTTCCTAGTCTATCTCGCTTCCCGTTATTCCTCCTTTTCTTCACTCCTCCGCCCAAAAACTGTTTCCTCCATTGCGGGTGTTAATTCCTGTAGTCACACCAGGTCTGCAATCTGGATTCGAACGCTACGAAAAGAGGCTCGAAGTTACGTTTTTCGAGCCCGTATCTTCTATGACCCTGAAGGTCAAGGTCTCCGGGCTTTAACCAAAGCCCAACTGGATGAGATCTTGAACCCTGCTGAATGCACAATTGTCTCTTCGTTGTCGAATGAGCATGTAGACTCTTACGTTCTATCCGAGTCTAGTCTGTTTGTGTTCCCTTACAAAATCGTTATCAAAACTTGTGGAACCACTAAACTGCTGCTATCAATACCGGCTATTCTGAAGCTGGCGGAATCGATTTCGCTTACTGTCCGGTCAGTAAGATACACACGCGGTTGCTTTATTTTTCCCAGTGCTCAATCGTACCCCTCACGCAGCTTCACCGAAGAGTTTCAGTGCTGGATGGTCTTTTTGAAAAGCTTGGT | |||||||||
gi|32538328|gb|CD854512.1|CD854512 DH0AMM30ZF11ZZM1 HaDevR6 Helianthus annuus cDNA clone HaDevR630F11, mRNA sequence GAGAAGGAGGAACAACCCGAA EST sequence (targeted fragment marked with yellow): GACCTTTTATCAATCGTTAGGGTTTCTCCTCTTTCTCTTTCATATACATCTCCCTCTTCCCATCATCTCCTCAAACCCAAGATTCTCTACTCCTCCATCGACGCTCCATCTCTTGTGGTTGCTCTTTTCCTCGGATTTCCTAGATATGATTCAAATCTCTTCATCTTTTATGAAACCTAATCTGATTCTAACCATCATTCTTGGTTTGTTCCTTCCTGTTGAGTTGTGTATGCAGGAGCTAAACGAAGGACAATGTGAAAAGCGTAATATGTGTCCACCTAAATTCCCTAGTAAATACTCAATTATCGCTTAATCTGATTTATTTGTTTATTAACTTTTTTGGAATCGAAATAGTAAGAAGAATTTGTTCAAGCATTGAAATTGCATCTGATTTGATTTGGAATTGAGTGTTAAGAGACTATGTTTTTGTCGCCATGCTAAATGTAGTGCACCAGATCTAACATCCATGAAAGTGTGAACACGTTTTCTTCTGAGTGATATAAACTGTTTGGATTGAGGTTTCAAATGTGGNAGAANAA | |||||||||