mature miRNA: TTATTTTGGGACGGAGGGAGT species: Hordeum vulgare database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|161483400|gb|EX599814.1|EX599814 HDP37O06T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP37O06, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AATATCACAAGAACCTGTTCTCTTATTGTACCACACTATGCTATATATTCCCTCGGTCCTAAAATAAGTGTCTTAAGCTTAGTACAACTTTGTACTAGAGCTAATACAAAGTTGAGACAGTTATTTTGAGACGGAGGGAGTATAACAGAAGCCAGTCTTCTTTTAGATTACACACATCATCCAGTGCGCTCAAACTGTTTATTCAATGCAGCGCGTGGTTCGATTCAGGAGTTGGTCGTGACCAAGCGTCACTTCGCTTCGGGTAATTTCCAGCCAATCACTTCGAGTTGAAGAGTGATAATCCGAGCCTGAGAGATGTGTCGGAGCTGTCCTCGGTGTCGAGGGGAGGGCGTGGATACGACGTGTTGGTGACAGACTCAGATGACTGCCCTTCATCGTACACCACCACCAGTGGATCAGCGGCGACCTGCATCTCCATCTTGGGCGCTTGCTCCTTTAGCCTTGCGTTCTCCTCTATC | |||||||||
gi|161437918|gb|EX591116.1|EX591116 HDP08F03w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP08F03, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GTGGGATGCCGAGGTGGACCTGGAGCCGCTTCTGCAGATGGCGAGGATGGACCTGGAGGACATCCGGAGCGGTACCGTGGTGCGCACTGTGCGGCCTCACCGTGGCGGCGCCGGAGGGAGCTGTTGCCTGGCAGACGAGAGCAGCATCGTGTGGGAGGAAGGACAGGTGGTGCAGGATGTGTTGCTCAAGCTCAGGAACGTCGCCACCGGCATCATCCAGCTCCAGCTTCGATGGGTCAAAATACCATCATTATGATCGATCCCTAATTATAATGGCAACTGGATTACCTACCCATGTGTTATTTTGTGTCGATTAATTTCTTCATGTATTATACTCCCTCCGTCTCAAAATAAGTGTCTTAAGCTTACTACAATTTTGTACTATCTCTAATACAAAGTTGAGACAGTTATTTTGAGACGGAGGGACTATCGTGCATCCACCTTTAAAAAATGAGTTATTCGTGGTAGTTGGATGATCGATCCATGTTAAGCTTGTGTCTATTTTTGCATTTAGCCATGCATGCAAGTTGCCAATTTCCCTGTGTTCTTCGGGCGTATGTGTAAAATTTATGTGATTAATCGATACACACTGCACCCTATC | |||||||||
gi|14527897|gb|AV835808.1|AV835808 AV835808 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): TTCAATAGCAGNNTCAAATTAGNATGGTCATGTACATATTACATGGTACTCCCTCCGTCTTAAAATAATTGTCTCAACTTTGTACTAGCTTTAGTATAAAATTGTACTAAGGTTAAGACACTTATTTTGGGACGGAGGGAGTACATATAAGGCTCAACCAGNATTAATTTAGGGGAGGGGGGAGAGGACTGTACAATTTCTGACAAAATTGGAGATGAACATATCTCCTGATCACAAACTCACCCTGACGTCCGTCAGAAAGATGAAAACCTCAATGCTGGTAAGGCCTCAAAGTTTCTCTAGTTCACGTTCCATCGAAGCGAAGTCAAAACCTTCCCAATCAAGTCCTACATCCAACTCAAACATTGGCAACGGTAGATGGCTGATGTCTGCCAGCCCGATGTAGTCGTCGCCAGGCGGTTTGCCTGTTGTGTCAACGAAGTCATTGACATGAAACATATCTGCCAGCCTTGAAATATCATCCAGTGAGAGTTTGTCAGTTGTGCAAACATAGTCACTGATAGGAAGCTCATTTATCTGGCTGTGGAATGCATCCACTGGAATTTCTTCATCGCTAGGTGTCGATGAGCAGTGCACTAAGCTTTCATCAACATTCATCCGGCCAAGGAATGCATCTACCTCAATTTCTTTACCTGGCAGTTCTGGTGAGCAATGCAGTAAGCTCTCATCAGCAGTGTCAGGGTCTATCTCCATTGGCGCTACCTTG | |||||||||
gi|30594664|gb|CD054077.1|CD054077 HO02K08S HO Hordeum vulgare cDNA clone HO02K08 5-PRIME, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GTGAGGAATTCGGCACGAGGTCGGTTCGATACGTTGTATCAAATTCTCTTCAGATGGTCGCTTTTTGGCAACAGCCGAGCCTATAGATTTCGTTCATATCTACGATTGTTTTGCCGATTATGGTAAATCTTATGAGATTGACTTTTTTGGTGAAATAGCTGGTTTGTCATTCAGCCCAGACACGGAGGCCTTCTATATTGGGGTAGCAGATCAAACATATGGAGGCCTCATGGAGTTCAAGAGGAGGCAGCAGCATCATTACTTGAACTACCTGTGGTGATGCCTTTTGGTTAGCACAGTTTGCTTTTGCAGCTCCTTTAGACGCGATTGATTGATCGTTTGGCGCTGTGCTGCAAAAACTGCATGGTTTTAGTCAAGGCAACCGATTGAGGAACTCATTGGACCAACGTGATTAGTGATTTGCTGCCGCAGCTGAAGCTCACTCCAGATAAATGAGCTGGATCTGNATAAATTTCTGTTCTGTCTTGNTGCTGCTAGGAACCAATGAGGATTATACTCCTTCCGNCTTAAAATAAGNGTCTTNAACGTTATACTAGTTCTAGTNTAAAGTTATATTAAGCTTGAGACACTTATTTTAG | |||||||||
gi|21162953|gb|BJ484507.1|BJ484507 BJ484507 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CCGGGCTCAGCTCCGTTCTGAAAACCAAGAGCCAGAAGATCATGGACCAGATCAGCGAGCTAGAAAAAAAGAGGGTGCAACTGATAGAGGAGAACGCAAGGCTAAAGGAGCAAGCGTCCAAGATGGAGATGCAGGTCGCCGCTGATCCACTGGTGGTGGTGTACGATGAAGGGCAGTCATCTGAGTCTGTCACCAACACGTCGTATCCACGCCCTCCCCTCGACACCGAGGACAGCTCCGACACATCTCTCAGGCTCGGATTATCACTCTTCAACTCGAAGTGATTGGCTGGAAATTACCCGAAGCGAAGTGACGCTTGGTCACGACCAACTCCTGAATCGAACCACGCGCTGCATTGAATAAACAGTTTGAGCGCACTGGATGATGTGTGTAATCTAAAAGAAGACTGGCTTCTGTTATACTCCCTCCGTCTCAAAATAACTGTCTCAACTTTGTACTAGCTCTAGTACAAAGTTGTACTAAGCTTAAGACACTTATTTTAGGACCGAGGGAATATATAGCATAGTGTGGTACAATAAGAGAACAGGTTCTTGTGATATTACCTGCTACTGTTTTTTC | |||||||||
gi|21144755|gb|BJ466249.1|BJ466249 BJ466249 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AAATGTAAGTTTTCATACCGTTGTTGTCTAAATTTAGTTGGCACTCAGTACATTTCCCTCCGTCTCAAAATAAGTGTCTCAAGCTTAGTACAACTTTGTACTAGAGCTAGTACAAAGTTGAGACACTTATTTTGGGATGGAGGGAGTAGTAGTTATGATCACCTAGGTATATGCAATACAACCTGATACCATATGTTTCTTTTTACATGCGACAATGTTTGTTCTGCTTGTGAAATTGTTTATAGAAAAGCTGATGTTCA | |||||||||
gi|21138003|gb|BJ459472.1|BJ459472 BJ459472 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vu TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CTTGGAATCGGAAACATGGCATAAAAGAGGGCTGATTGAAGTGAGCACAGTACAGAATGATTACGCCGCATAATCATTGTGTACTCACTTCAATCATCCCTCTTTTACCAGCATATCGGCTGTCATAACTTTTCTGCTCCCTTGTTTTCACCAGCAGCCATCTGGGTGTTTTTTCTTTACACATGATACTGATTTTAGTCAACGGCAACCCTACCATTATAGCAAATTATGTGTTCCGCGTATTTCTGTAGACATTTCTCTTAGCAAGTACTCTCTCCGTCCCAAAATAACTGTCTCAACTTTGTACTAA | |||||||||
gi|59942919|gb|DN157025.1|DN157025 GCN003I08u GCN Hordeum vulgare cDNA clone GCN003I08 3-PRIME, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GCTCGAGCGGCCGCTCAATTGCTCAAGGGCTCCCGATTGATGAGTTCTCGAGGAAGAAGATGGATGCGACCGCCCAGGAGCTGTCGGAGGAGAAGGCGCTGGCTTACTCATGCCTTGAGTAAATCAACATTCGAAGAGCAGTTGATACTCTGATGTTTTGAATAAAAGAAACCTTCCGCTTTCAACTCCCGTGTCCACCCAGAACAGCTGCACAGCACGGTGCATGCTCCTTTTCGCTGGTTTCCAGTGTGCATGAGGCTTGTAGCTCCCCTTTTACCTGAACATTTGCTGGAAGATTGAAACAGTTTGACACCTGATTAGAATCAACTTCTTTTTCTCTTAGAGCATTCAACAAGTCCTATAAAAATTCCCAGCGGCCGCTATTGAAGCAGATAGTACTTGTATACGAAGCATACACGATAAAATATTGATTCACCTATTTAGTCAATAAGTACAAGATCAATAAATGTCTTAACTTTATACATGTTTGCTGGTAAATACTCCCTCCATCCCAAAATGGTTTATACATGTTTGCTGGTAAATACTCCGTCCATCCCAAAATAAATGTTTTAACTTTATACTAACATCAGTACAAAATTATACTAAAGTTGAGACACTTATTGTGAGACAGAAGAATGAAACCAAATAGTCAAACCATGGTTACGACTATGATGAACTAGCATGGAAACCCAGGGTAATA | |||||||||
gi|161480516|gb|EX589773.1|EX589773 HDP16H07T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP16H07, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AAGATCAGAACTTGAGCTAAGATTAATACACTTCCTCCGTCCCAAAATAAGCGTAGCTGATTTAATACAAAATTGTACAGTATATGCCCAAAACCTGCACAACACACAGCGTCAGCTGATGCGTGTTATAATGTATCGGCCTTTCTCTAAATCATATATAATCCTTGTCTTGGGCTTCCTCCATCTCAACACCAAAAATACTCCACAGGCAAGAAACGCTCCCAGCACAGCAAGGAGTGGTCTATGCTTATGTGCCGGTGCTGCGGCAGCCCCTGATGCCCCTAGAATCCTATGTTTTGTATTTGCAATGAAAGCTCCCAGGGCCCACTCAATATGAGTGTCGCCGACCTGATTTGAATACTCAATCCTCTTGTCATCCAATGGTACGCCAAGGCTGTCGTGCAGCAGAGCTACGATGTATGCCGACGGGAAGCAATAACGTGAGAAATCTTCATCCAAATGATTGAGGTACTTTTGTCTCAGCGTGGACAGCTCCTTGTTGCAAAGTTGCTCCCCAGCAACCACAAAATCAGACAGTGATGAAGACCGGTCTAGTCCAAAAAACTTAGACGTAAAATAGAAATTTTCAGTTGCTAGGAAATGCCCAAGCAGCTCAGGGACGAAATTAGATCCTAGGTGACATTGCTGATGCTCGCACTT | |||||||||
gi|16318242|gb|BE060539.3|BE060539 HVSMEg0012J07f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow ant TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GAGACGGCGCTCCAGTAAATAAATATCAGCTNTATTTTGTGGGGTTTTGTTTGTTTGGAACAAAATATTCTAGAAGCCTAGAATGCATGATCATCTGATTCACGAATGTCTACTTTCTACCCAATGTCGGTTGCCTGCAAGACTTAAACACACCCTGGAATTGTGATAACTGATAATATTTTCTTTTGGATCCAGTTCGATGTTCATTGGATCGTATCCCTATGGTTTGGTTTGGTTTGTTAAGATTGCAACCTAGTTTAGTTTGACAAGCTTATGCTCATGATCCAAGGAAACTACATACTCCCTCCGTCCGAAAATAGTTGTCTTCGAAATGAATGTATCTAGACTTAATTNTAGTTATAGATACATCCATTNTATTTATTTCTAGGACAAGTATTTCCGGACGGAGGGAGTACATGGTACCAGTGAAATATGGTTCACACTGTGTCTTTCGATTGCTGTAGTCTGGAGAACAAACTANTAGTTTCAAGTAATCGTAAGTTTGCTAACATTGATTATGTTACACATTATAGGTACGTTCAAGCTGACCCTGCAATCACAGAAGATTACCCCAACAGCCACCAACTGTTCGGGTTGCTAAAGATGTTCACCCAAACAGTATGCCCTCTTTATGACTTTCAATCAATACTCGAATGCTCTTGAAATGACTAACTGTTTTAT | |||||||||
gi|13153913|gb|AW983462.2|AW983462 HVSMEg0010L12f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow ant TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AGCTATCAGGGATATGTCTAGCAGCGACCCTTATGTCGTCTTGACCCTCGGACAACAGAAAGCACAGACTTCAGTGATCAAAGGAAACCTGAACCCCGTCTGGAATGAAGAACTCAAGCTCTCTGTTCCTCAGAAGTACGGGCCTCTGAAGCTGCAAGTGTTGGACCATGATATGGTTTCCAAAGACGACCTGATGGGGGAGGCCGAGATCGACCTGCAGCCCATGATCAATGCGGCAGCATCGTTTGGAGATCCAGAGCTGCTCGGTGACATACAGATCGGCCGGTGGCTCAAGTCCGGTGACAACGCTCTAACCGCCGACAGCGCTGTCATGGTGACCGGAGGCAAGGTGAAGCAGGAGGTTTCCCTGAAGCTGCAGCACACCGAGTCGGGGGAGGTGACGGTGGAGATGGAATGGATGGCTCTAAACATGTAGAGAATCCGGATACGATGGCAAATTTGCCAAGGCCACTGCATACACAATGATGTGTTGTACTCTCTCCGTCTTAAAATAAGTGTCTTAACTTTGTACTAGCTCTAGTGCAAAGTTGTACTAAGCTTGAGACACTTATTTTTGGACGGGGGGAGTAGTATTTTGCTTGAAAGGGGTCCAGTGAATCAACTTTTTCTTGGAAAATAACAATAAGTTCTGTTATGACAAAAAAAAAAAAAAATAACTTGAGGGGGGGCCCGGGGCCCCAATTACCCTTTAAGGAGTCGGATTTGAATTTCACGGGGCCGCGCGTTTACCACCATGAGGGACTGGGAAAAACACCTGGGGGGTGCCCCGAACTTAATTTGCGTTGTGGGACGTATTCG | |||||||||
gi|40953417|gb|CK567843.1|CK567843 HO08B11w HO Hordeum vulgare cDNA clone HO08B11 3-PRIME, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CCATAGCTTTATATAAACCAACACTCACACCCAAGATGACGCAAGACAATAACCCGGATCTTGATTTACAAAACCTTCACACGACCACCTTATAGACGGATGATCACATTACAAACTTAATGACCAAGCTTAGCCCACATGTTGTGCTTGATTAACATCGTCCTGGAACAAGCTACACAATTGCTTGATTTTCACGACATCTCATGTGATATTAATGTTTATGAGACATTGTGGGGCTTTCCACTGATTATGTACGTAGTACTCCTACCATCCCGAAATAGAGTGCGTATTAGAAAATTTTAATTCAAACTTTGTATCGTTTGACCAAGATTATTAAACAAATTATCCACATCTATATATACTACCATTACTAGATTCATGCTATATATTTTCATTTCATATGGTATGTATTTGGTATATGGTAGATATGGATGATTTTCTTCCTAAACTTGGTCAAACTTTATGAATCTTGACTTATTTTAGCACGTCGGGAATGTCCACCGGATACCTGCTGATGGACGAGGTCCACGGCCCATCGGTGTAGCGGGCAGCTGGTTGGATACACTCCCAAACC | |||||||||
gi|161476012|gb|EX585969.1|EX585969 HDP40L20T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP40L20, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): ATTAAAGGCCAGATTTCTGGACTTGACTAAGTACTGCTGGTGTTATTGCTACACTACATCTCATGAAACAAGTATTGAGCATGTAGCACGTACATGCATGATGATACTTGTCACCTACTTCTCCCTAGACAGTTAGCACTGATATATCTAGAACTAAGCCTCACAAATACTCCCTCCGTCCCAAAGTGACTCAAACTTGGTACAACTTTAACACTTATTTTGGGATGGAGGGAGTAATTCATACATCAACCCAATACCAAATGTCAAGGGATTCATTTCATAGATCATATATCCAAGCAACCACATTATAAGACTCGCCGATACTTTTTAGTTTGCTCAGTCTGTCGTCTGCTAGACACTACTCGATCATCCAGTTACAGGGCGACACTAGAAAAACTATCTAGCAGGTAGTTAAAAAGATGAGGATCCCTGGAATAAACTTGCTATGTCCATTGTCCAGTAGTCAACCTATTCAACAAAAGCAAATAAAGAAGGCAAAAAAGGCATCAAGTTTATAACTACAAAACTGACATGGTTGCACACTATTGTAACTTATTAACAGTGAACAAAATCCTATCAAGAATCTAGTCCAATGGACAATGGAAT | |||||||||
gi|217046004|gb|GH212229.1|GH212229 HVSMEb0005N14r2 Hordeum vulgare seedling shoot (dehydration stress) cDNA library HVSMEb (HVc TTATTTTGGGACGGAG-GGAGT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTAAAAATTGAAAATTCAATAGGCTTCATTACAACTTACTCCTTAAGGAATACTCAAAATGATGTCAATTCCACTCCGTCCCAAAATAAGTGTCTTAAGCTTAGTACAAATTTATAATAAAGCTAATACAAAGTTGAGACAGTTATTTTGAGACAGAGGGAGTATATGGTAAAACATTCTCAAAATGTATAGGCGTCTGCAGCAAGTATTCATACATAGCTCGCATCAACAGCAGTACGGTTTCAACCGGGCAACTGGAAGATGAATGACGTTTTGATGGTCTGGACGGGGTCGGTGCAAACTGTANCCAGACAACTCACTCCTGGTCAGCTTGGGGACCGATATGGCTGGGATACTTGAATGAGATATCGGTCCACGTGCTTTGTCCTTCTGTCAGCTCCTTCACCACCGATGCCACCTCGTCGATGCCCACCCTCACCTGCTGCTTGCTGTCCCTCTCTCGGATCGTCACCTCCGTTGCAGAATCGACCGTTACTGCAAAAGGAACACCGATCTCGTCCGTC | |||||||||
gi|12038045|gb|AL511542.1|AL511542 AL511542 Hordeum vulgare Barke developing caryopsis (3.-15.DAP) Hordeum vulgare subsp. vulgar TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): ANCCCGTTCGCCTTCGCCCGGAGTACGGCGCCAGCGGGCAGGGGGTGCTGCGGCCGCCGAACGGCGACCCCGGGTTGGACGGGATGGTGATCGTGCTGGGGCACGAGCTGGCGGAGCTTGGCAACCAACCCGCTTGGTGAACGCGTGGTACGCCGGTGACACGCCAACGGCGCCCACGGAGATTGCCGACCTCTGTCTCGGGGTCTACGGCGACGGCGGTGGAGCAGGTGGGTTCGTTGGGAACGTGTCCCACGCAGCCGACGGCAGCTCCTACAACGTGAACGGCGTGAATGGCCGGCGGTTCCTGGTGCAGTGGCTCTGGAACCCCGTCCGCGCCGCGTGCTACGGACCCAACTCCAGCAACTGAAGCCGCTCTGCTATTCCCCTGATCCGTGGCTTCTCTCAGTTGATGCCATTGCGCTGGATGGCGTTGCAGAGGCAGGAAATTTGAATGTCTGAAATGTCATTCAGACTCGATCTGTTCCTTGATTTGTTGACCCAGGGTTTGCGATGGGTTTATGATTTTGATAGATCTGTATCTGTCCTGTACTCCCTTAGTCCTAAAATAAATAATTCTAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|21971774|gb|BQ763302.1|BQ763302 EBro02_SQ007_K22_R root, 3 week, hydroponic grown, low nitrogen, cv Optic, EBro02 Hordeum vul TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CAACTAACAATTCCAGATTTTGTCTTTCAGCATGATCTCGAAGTGAACGGGGGAAAGGGCATAATCGTTGATCCTAGAACAAAGCATGTCTACCAAAGACCGTCAGGTTGACATTTAGCAACTTGTCCCTCCCGGTTCCGGGTCACCCCCCTGTCAAATCTCTGTTCTCTGTAGAAAAGTTCACATCTAGATCCGTGAAGTATGTATCTAGTTGAGTTGACATTATGTTCTACTCCCCCTGTCCCAAAATAAATGTCGCTGCTTTAGTATTATATTTGTACTAACTTAGTACTAAATTTGCGTCACTTATTTTGGGATGGAGGGAGTACATTGCATTCTTTCTTGTCTTAGGAAGGTAGTTATGTATATGTATTTTGTTCTGTATAACCAAATAAAGGCTGTACCTAAATCTCAAAAAAAAAAAA | |||||||||
gi|21184033|gb|AJ468077.1|AJ468077 AJ468077 S00008 Hordeum vulgare cDNA clone S0000800063H09F1, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GGTTGAAAGCCATTCCTGACTCACTTTTAGCTGACAAATTTCACATCATTCCTGTGTAACTGAATTGTGTAATTGTCATCTATAGTTCTCCTTTATGTTTGCTTTATTTGTTCAGGGCAAATATTGGATACAAATAGTTTCAATATATTAGTATGTCTAGCAAATTTGATAATTCCAAAGAAAATCTAGATGTACATATGATTTGATATTTTTGGTATTAGCATTTATATTGTAACATGTCAGTACTTCTACAGAAAAAGAAGCCATTCCATGTCCTTAGTTATGTTGTAATTCCTCCATCCCAAAATAAATGTCTCAACTTTGTACTAACTTTAGTAACTTTGTACTCCCTCCATAAAGAAATAGAAGAGCGTTTAGATCACCAAAAGTAGTCATCTAAACGCCCTTATATTTCTTTACGGAGGGAGTACTACGCTTGAGACACTTATTTTAGGACGGAGGGCGTACTTGTGAAACAAA | |||||||||
gi|13120380|gb|BF259979.2|BF259979 HVSMEf0020M13f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AACCAGTCAGACAATCAGATGGAGGAATTGTGTGCCAACATCAAGGTGGGAGATAGATGTGAACTCGAGCCAGGTGCCAAGAGGGGCACCGTGAAATTCGTCGGCAAAGCTGAAGCCCTTGGGCGTGGATTTTGGGTTGGAGTGCAATACGATGAGCCACTTGGAAAACACGATGGCATGGTGAAAGGAGTTCGCTTCTTCGAGTGCCCTCAAGGGCATGGAGCAATTGTTAGGCCAGAGAAAGTGAAGGTTGGCGACTTTCCGGAGAGGGACCCTTTCGATGATGAAGATGAGATATAGGTCGGCAACTTCTGGGAGAGAGACCCCTTGGAGGAAGACGAAGACCAAGACAACAAGATATAAGCAAGCAAGGCTGCAAGAGTGCTCATGCTTTGGTGTGCCTTAACATGTAATTGTAACGATTTGTGGTGTGCTGCCTTCGAAAAGAACACTCTGAAATTCATTGATGTTGAGGATGATGTGAGATGGTTGAAATATGCATGTACTCCCTCCTTCCCTAAATATAAGTCTTTCTA | |||||||||
gi|217040472|gb|GH208033.1|GH208033 HV_CEb0007D24r2 Hordeum vulgare (Blumeria challenged) seedling green leaf cDNA library HV_CE TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTCATCGTTTATCACTTTATTCATTATTTTATCAACAGTACAAAATTATATTCTTGTATCAAGCTAACATCCCAAACAGGTAGGTAAATACCTCCTCCGTCTTAAAATAAATGACTCAACTTTGTATTTACTTTGGACTAATATAAAGTTAAGTCATTTATTTATTTTGAAACGGAAGGGAGTATGTGGTATTCGACGACACTGAAACTGATATGGAAATAAGCAATTAGCCTCATATTAGGATATACCACCCTCATACCTAGCGAATTTTCCTACACACGCCACGGCAGGAAAGCGATCAATGGGAGCACGTATCTTAAGGCAAAGCCGTGCTCGATCAGAGCTGTGGAAACGCCTCACAATCTTCGGTTTTACGCTTATATAAGTATAAGCTCTTGATGGAAGAAACGTTGTTGATGAGCGGCCGTCAATTAGTTCCCTTGCTTTGCTTAGCAGCACAGCTTGGCGCGCAAGTCAGCCGCGTCCACCTCCTTGGCGGCGCCCGACGGCCGGTAGTAACCGGTCACCGGGTCCGGCACCCACGC | |||||||||
gi|13153337|gb|AW982675.2|AW982675 HVSMEg0003O13f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow ant TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GTAACATCGGTCTTGCATCTCTTAAATTGATGATAAATACAATAAGGTTTTGTTAGGACCTCGAAGAAACAGTAGGCAGGTGAACCGTAACCTAGGTCTTGCATCTCTTAAATTGATGATAAATACAACAAGGTTTGGTTAGGACCTCGAAGAAACAGTAGGCAGGTGACCCGTAACCTCGGTCTTGCATCTCTTAAATTGATGATAAATACAACAAGGTTTTGTTAGGACATGGAAAATTCAGCTAATATTACAGGCCATCGGTTCCTGAATGCCCAGCTTGTACAACATTTAATTTGCACTGCCAGTAGAGATTTTGCGTGTGCTGCGCCAGACGTTATGTATCTTGATGGATTTTAAGAAAGAGATGACAGTGGCTAGTATCCGCAGTAAGTGTATCTTTCAGTCTAAGAACTGAAAGATTGTCTTCTGATATACTTCCTCTGTCCCAAAATTCTTGTCTTAAATTTGTCTAGAAATGGATGTATTTGGGATGGAGGGAGTAGCTTAAGAAGTCTTTAGATGATACTACTATCATCCTAGGCAGGGAACCTTGTACCTCTGTCTGGCTTACATGTTTATTAATCGACCTGAAAAAATCTTAGATGAATGCGTGGAAAAATAAGTGCCGGTGATATTTTTTGGCAGAAAAACAAAAGGTACATTTTCAGGCATTGGCCCAGCCCTGCCCTTTCAATTGGATGACCAGTTCCAATTTTTGGTGTTTGGTTGCGCCATCCACTTCTTTGGTTTTGCCTCAAGAAAACACCAACCTGGCTGCCTTTTTTTGGAAAAATATAATGAATGGAATGGCCCTTAGCCTTTAATCAATTGTTTAAATCCAGGGATGGG | |||||||||
gi|166068764|gb|FD519474.1|FD519474 RUS41A11w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB19O06, TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AAGTCAAACTCTTCCAAGTTTGATAAAGTTTATAGAAAAATTTACCAATATCTACAACATCAAATATGTATAGTATGAAAATATAATTTATGATGAATCTAGTAAAGTAAATTTGGCGTTGTAAATGTTGGTTCACTTTTTTATAGACTTGGTCAAACTTGACAGGGTTTTAACTTGGGGCAAACCTAGACCTTCAAATACTCCCTCCATCCCAAAATTCTT | |||||||||
gi|161476493|gb|EX595552.1|EX595552 HDP24I01T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP24I01, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AGTGGGTTAACTATTTCACATCTACTCCCTCCGTCCCATAATATAAGAGCTCCGTATAAATACACGAAGACCGTTGAACAGAAATTGGTCAAAGACAACACCGTTACAAGACAGCTGTCAAATTATTTCTTCATCATCTGATGTAGAGACTTACCAGTAACTTTTTTATGGCTTGCCGATCATAGCTGATACACAAGAGAGAAATTCGTCCCATGGTGGCTGACGCCAGGGATCCCATGAAGGTTGATTTCTGAAGCCCAACACCATATACCCAAAGCGACGGATCCTAACTAGAACTCGCAAATGCTGCTCCAAATCGGATTGTAAAAGGCGATCCAGTAAACATGGTTTCGTTTACAGTAAAATTCAAAACCGGGACGCCGATACATAACGGGCAGTTGAGTTCCGGCGTGCAGCCAGGCAAAACTTGGGTCCTCACTCACGCTAGAATGCTGTATTTTTTGTACGATTATGCAGT | |||||||||
gi|30600995|gb|CD057309.1|CD057309 HO14M03S HO Hordeum vulgare cDNA clone HO14M03 5-PRIME, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CGGCACGAGGTCACTTTGTCGCATGAAAAGACAACTTCCTCTGGTATATATAAATTCCTGTGAATGCAGTATACTCCCTCCGTCCCTAAATATAAGTCATTTTAAAGATTTCAATATGGACTACACAGGAAGCAAAACGAGTGAATCTACACTCTAAAACACGTCTATGTACATATGTATATGTAGTTCGCATTCGAACCTTTAAAAATAATTATATTTAGAAATGGACGGAGTACATCGTCACAAAATGAAACTTCCTCCCGTGCAAATTCTTGCCCTGTGAAACATTGCATCACACAACAACGCTCTGCCGCTCAAAAAACTTCACAAGTTTACTAGTACCACTTTGATCTGCCATGGGTCGGGTTAATCTGGACCACCCATGTTCTTATGCTTATTAGCATCAGTACAACGCCCTGGCCAAGTTCTTCAGGCAGGGGACTTTGCAGAATTTTTCCAGCCCAAGCTTATGTGCAATGTGCTGATTGAGGATGCCCTTGCTCATGTTACTTTTC | |||||||||
gi|21944593|gb|BM097988.2|BM097988 EBpi03_SQ002_D20_R pistil, 4 DPA, no treatment, cv Optic, EBpi03 Hordeum vulgare subsp. vulga TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): TCATTGTTGGGTCTCCGCTTTTATGTACTCCCTCCATAAAGAAATATGAGAGCATTTAGATCACTATCTTGTACTCCCTCTGTCCCAAAATAAGTGTCGTTGAGCTAGTACAAAATTTGTACTAATTTAGTACTCCATCCGTAAATTAATATAAGATCCTTTAGATCACTAAAATAGTGATCTAAATGCTCTTATATTAGTTTATAGAGGGAGTACAAAAACTGCGACACTTATTTTGGGACGGAGGGAATATTTCTTTCTGGAGGGAGTACAAGATTTTGAGTGCTTTTCCTTTCGGAGGACGTAAAATGTTTATGTCTATCTTGGTGCTTCATTACCAGAAGCAGTAACACCTCCACTGCCCTCTTGACCTATACTCTACAACCATGCAGAAACCGCTTGTCTTATGAGCAGTTCAGCGCATTCCTAGCCAACGTGAAGGAACTGAATGCACACAAGCAGACCAGAGAGGTACACGTGGATATGAATCAAATTTACTGTTTCTCTGCAATTTATCAATCAAGTATTATCATGTCCTTCAGATATTTTTCTGGTGCTCACTAAAGCTTTTGTGACTTCTGCAGGATACACTAAGAAAGGCTGATGCGATCTTTGGCCCTGAAACAGTGACTTGTCACTATC | |||||||||
gi|21163294|gb|BJ484849.1|BJ484849 BJ484849 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GATTCAAAGACCAAGAAAGATGGTGGAAATGATCCCATGGACGAGAGTTGATTGCGGGGTGCACCTAGGGCTGTAGCCTTGATGTGAGTTGCTCATGCCGTCATCTGCGGTGGAAAGTATCAATTTTTAAATCTGATGGCACGCAAAGCACAGGACGTTTTATTTGGCACCCCCTCCGAATCTAGATACTATTTTGGCTGTGAATTTTAGATGCTTTCAGTCGCTTCCATATTTACCAGTTGATTCCGTGTCGTGACTTGAGTATTCTAAAAAATGCTTCCATAGGTTTCGGTTGGTACAATTGCGTGACATGGATATATTTTCAAAAATGCTTCTGAGGTTCTAGCTGGTACCGTTGTGCGACATGAATACATATGCTCTGTCTGTCCCAAAATAACCGTTTCAACTCTGTACTAGCTCTATGGTATCGTTGTGCGACATGAATATATATTCATATGCTCCGTCTGTCCCAAAATAACTGTTTTAACTTTGTACTATCTCTATTACAAAATTATACTAAGTTTAAGACATTATTTNGGACGGAGGGAG | |||||||||
gi|166067561|gb|FD518677.1|FD518677 RUS30C06w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB04H15, TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CCATTAAAAGGGACGTAACAGATGATACCTCCTGACAAATAAGTATAGAAAGTAAAGACCAAAATTTTCACTGTTGACCCACTTTTTAACTCATATGCTACAAGGACAGCAGAACCTAGAACATACTCCACTAGACAAGGGGGGGTAATATTCAGAATACTACACCCAGGATTTTAACCACAACCAATACAATGTAACTTTGCACAGCAAGATACGGTAAACACGGGTGGAGAGAAGCATCAGCTCGATGTCAATTCGAAATCCTTCCAACTCCATCTTCTGCGTGAGCACTCAATGAGCCTAGTTACAAGTACCCATCAGCTTTGCACAACTTTGCATCTTCTGCCTTCTTGCTTCCCAAGTTCCTTCCAATTCATGTACCTGAGCATAACAAGGGCCTTTCATGAAACTGGTAAAGAGATATAAATTAGTATGAATGAAAGGACAAGCACGAGACAGTGCATCATCAGCCAAGATTCATTATCTACATCAAAGGATCACTATAATCTTTTACGAAGGTGATGTTATCTAAGTCTTGACAGATTCATAAGTTTATTATCCACATTTTCGTACAGATAAAATAATACTCCCTCCGTCCCAAAATTCTTGTCTTAGATTTGTCTAGATATGAATGTATCTAGTCACGTTTTAGTATTTTGATATATCCATTTCTAGACAAACCT | |||||||||
gi|161423167|gb|EX591854.1|EX591854 HDP04C10T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP04C10, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CCAAAAATAATACCAAGAGAAATTGATAATTACAACTGACAGTAGCCATGCTCCTGTCTTGCTCTGAAGTAACTGAATGTAGAAGTAGCAGAAATTAGAGTGTACACGGAACAATCTATTTATCTGAAACCGGCATATCAAGAAGACACTACCTGCAAGCTGAAGTTCCACAGCTTCTTGGCCAACTCTGCATCTACAGCTTGCGAGCTTGGGTTTGCTATATTACAATTGCCGAAGTATTTACCAGTTATCCCCTGGACTTGAGGGTGCATCGCCACATAACATGTTGTTGCAGCACCCTGTTCGATGCTCCTGCTTATGATTCTTCCAACAGTATTCATCAGAGCTGCAATGGCATACATGCAGTAAGGTTATACTCCCTCCGTCCCAGAATAATAAGTGTCGCAAAATTTGTACTAAGTTAGTACAAATTTTATACTAGACCAACGACACGCTCACAATAGTCCTGTTCCTGAAAAGGCTTGTGGCGATGATCCCGGGATGTACCGTG | |||||||||
gi|161435250|gb|EX575990.1|EX575990 HDP13P17w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP13P17, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GTGGAGTTATATATCATCACCAACAGGATTGTTGATTACAATATTACATGGAGGTCTCTGGAAGGTGCAATTCTGTTTCACCATCAGGCAACAAATGCAGCATGCTTTCTGATTGACAGATCAAGTAGTGGAAACCTAAGGCACACATCTTTCTTCATTCGACTGCTTGTCATCAGTGCTGTACTACCATCACAGGTACCACCTGAAGAGATGGACAGTGTTGAGATGACAGGCACCAAAGGGACATTTCACCAAACTAGTACTCCCTCCGTCCCAAAATAACTGTCTCAAGCTTAGTACAATTTTATACTAGAGCTAGTACAAAGTTGAGACACTTTTTTGGGACGGAGGGAGTAACTTTTATAACTAAATATAGTTAAATCCTGATTTACGGGCAAGGCATATTTTCCGGCTTATGTAAGGGAAGGTACAACTAAGGTTGATCTGACGTGTT | |||||||||
gi|30067126|gb|CB865150.1|CB865150 HD08J17w HD Hordeum vulgare cDNA clone HD08J17 3-PRIME, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): ACTGGGAAAGTACTCCCTCCGTCCGAAAATACTTGTCCTAAAAATGCATATAATGGATGTATCTACAATTAAAATAAGTCTAGATACATTCATCTTTAGGATAAGTATTTTCGGACGGAGGTAGTAAATGCTTGTTAACCTTACTCATTGGATAATTACAGATATAACCATGCATACAGATAAAGATGCATGACCCATAGAACAGTGTCAGTGCACCAGGCGGCAGATACAGCATCTGATTATTTTACAGAGTGGATAAACAGGAGGACAACATAGAACCCTAGCACGGTCCTCCTTGCAAGACTATCTCAGACTTGATTAATGATTAGTCTTATTCTTCAAGAATTATTCTGTCAACTATCTTTGCACCCCTTGATTTGGCCATGTAAAGTCCCATGTGATGCATAAGATCCTGTGGATGGGCCAAAGCTCCTTTGATACTCCTGGCTACTTCGACAGGGAGGTCAAATGTAGCACATCCCTCAGAATAGATCACAACATCTTCCAACGGGGGCACTCGGCCAATGTTTCTTGCAGCCAGAGTTGAACTCACAAAGT | |||||||||
gi|161467753|gb|EX584893.1|EX584893 HDP01A23w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP01A23, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GGGAGAGTTAGAACCCCAAATTGTGGACCCCAAGAAGGGCTGGGGATTCCGTGGCGTTCATAGGGCTATAATATGTGGTAAAGTTGGACAAGCGCCTGTGCAGAAAATTTTACGTAATGGGCGGACGGTAACTATATTCACTATTGGAACTGGTGGCATGTTTGACCAGAGGGTCATTGGGTCTGCGGATACACCAAAGCCGGCTCAGTGGCATCGCATAGCTGTTCATAGCGAGCATCTAGGTGCTTATGCTGTTCAGAAGTTGGTGAAAAACTCTGCGGTATATATTGAGGGTGATATCGAAACCAGGATCTACAATGATGGAATTGATGGTCAAGTCAGGAATATACCGGAGATCTGTATTCGGGGTGATGGTAAGATTCGTCTGGTTAAATCTGGGGAGAGTGCTGCTAACATATCACTAGATGAGCTGAGAGATGGATTGTTCTAGTTAAAGCTATCGATGTCAGCACAAGCAGGTCATAACTCGTAACTAGCGGCGGGTTAAGTCGAGAATAAGGCGCTGCTTTGTTGAAGCCTTGAAGCATGACATGGATATTTGTTGCTCCTTCCGTCCCATAATAAACACTCTTATATTATGGGGCGGAGGGAATACATCTCAATCTTGGCAGAAGCAGTTAAATTTACCAGTGGATGCATGTAAGCCTTCCTGGAACCCGCTCGTGTGTTTTACCATGTT | |||||||||
gi|21061446|gb|AJ462526.1|AJ462526 AJ462526 S00002 Hordeum vulgare subsp. vulgare cDNA clone S0000200063G10F1, mRNA sequence TTATTTTGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GCTGAACCCCGCAGTTCTTATGTCGAAGGTGCTCGTGATGTTGCTGTTTTGGAAGCCATGCTTGAATCTAGTGCGAAGCAAGGAGCCATGGTGCATGTGAAGAAATTCTAACAAATCTCAATTAGCAAAAGGAGGAACGTGAACATTCTTCTGCTAGAGTGATGGTCCGGCAGGACGCGAACATTTGTAGCATCGGTGACAAAAGGAACATCATTTCATGATTATTCCATTGATGGTGTAGGATAGGATGAAAGTCAGGCTGCTCCCTGGAACCATCATTCTTTCACACAGATCTATACGACAGCTGCTACAGATTTATTTACCCATATACTCCCTCCGTCTTAAAATAAGTGTCACAAA | |||||||||
gi|161447640|gb|EX581268.1|EX581268 HDP22B07T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP22B07, mRNA sequence TTATTTTGGGACGGAGGGAGT |