| mature miRNA: CCATGTTATATGATTCTTCAT species: Mimulus guttatus var. nasutus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|238073283|gb|GO950663.1|GO950663 CCII5123.g1 CCII Mimulus nasutus SF floral buds (H) Mimulus guttatus var. nasutus cDNA clone CCATGTTATATGATTCTTCAT EST sequence (targeted fragment marked with yellow): TGATGAAGCAGGCTTTGATGCTCACCCATCAGTATGAGAAAATTGGTAGCAAAGGTACCTCTGAAAGATCGGATGTGGAACAATGTAGTAAAGCATAGTCTGTTTAGGGGTGAAGAAAGTGGAAGCCCATCTCTGGATCACTTGATTGCCATATATGTTGAGAGGAGTTATATAATATGGAGGCTCCCTGATCTGCACAAGTTTTTATATGAGTCGGCAGTTTTGGTGATTGAGAATCTGGAGAAGCATGCAAGTGATGTCAAGGACTGGGATTGCGTGAGGAAAGAAGCTTTCTCATCAGACAAGAATGAGTACTCTCATTTGTTGGTGTCGGATTTCTCCGATTCCATGCCAACAGTGCCACCTGATAACTTGCAAGAGTTTATGGTTGGTGGTGGTGGTGGTGGTGGGGTTGAGCACCATCAACATATGCCTGAAAATAATAATAATATGCCCATGCCGCGTGACGTTTCGAACCGGAATGCGCTAGCTGTTCTGTTCGAGTCTATGTTACCTTGGATTAACTATGGAAGCAGAGAGGAAGAGGAAGATGATCTCCCAGACCAAGCCAACCAAGATTAGATTCTTAAATATTGATTCAATCCAAGTTTTCAGTTTTTTATTTGAGACCTAGAGGTTTGCGTGGCACATGAATTGCTCTAATTAATAGGTTGCCAAAGTCCTCTTGAAGACATTCAAGAATAATAATGTTTGGATCTTTTTTAATGTAGTAGCTACTGTGAAATCATCGTCATACTTGAAAATTTACATTCATTCTCTATTTTAAATGGAACTTATACTTC | |||||||||
gi|238095522|gb|GO970210.1|GO970210 CCIH6920.g1 CCIH Mimulus nasutus SF floral buds (L) Mimulus guttatus var. nasutus cDNA clone CCATGTTATATGATTCTTCAT EST sequence (targeted fragment marked with yellow): TGCAGTACAGTATCAGTGAGTTTTTCAGCCATCCGTCTGGAATTGAAGCGTTGCTGAATACAAGGGCCTTGCAAAGTTACCAATCACTTGATTCCAATTTGTACAGGTGCGTTCTGCCACAGCTTCAACTTCTTAACTTTAGGGTTGCGCCGGTGTTGGACTTACAAGTAACTCCAAGTAGTGAAGACTGTCTAGTCGAGATGTTATCGTGCAAGTTTGAGGGTTCTGAAGTGGTGGAGCGCCAGAACGAGCACTTTTCAGCTTCGATGAAGAATCATATAACATGGGAGACTATCGATACCGAACAATTCTTGAATGTTGACGTGAAGTTGAATCTCGTCCTTGAGATTTACACACAGCCGTTTGCGTTACTTCCCATATCAGCAGTTGAGGGTCCAGGAAATATAATGATGCAAACCCTAGTGGACAAGCTAGTACCTTTGCTCGTACAGCAGCTTCTGCAAAATTACGAAGAATGGATTCTTCAACAACAGATTCTTATTCCGTGATAGAAAAAATCTTTCTTATTCTACTCGTCCCATGCAATGTGAAAACCTTATCGGTCATATGCGACGTAATGCCGTCGAAGAGAGAGAAAATTTGGCGCGGATACAGATGGTCTTTTTTTTTTTCCGATTTTTTTTCGAAGAAGGATACAAATAATCTCATGATGTGTATATAGTTTTCGAAACCAACATATTGTACATTCATTTATACTACATAAGTTTATGTAAAAGTAATTCATATTAATGTTTACGGC | |||||||||